| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0430 |
|---|
| Symbol | |
|---|
| ID | 6783257 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 508142 |
|---|
| End bp | 509455 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642766399 |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_002137255 |
|---|
| Protein GI | 197116828 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGCGA CAGACAATAA AGTTCCGCTG CTCAAGCTGA GCAACATAAG AAAGTCGTAC
AAGAAGTCCG ACTCGGGCGA GCACCTGGTG CTGGACGGGG TAAACCTCAC CATCGCAGAT
GGGGAGATCG TCGCGCTTTT AGGGCGCTCC GGCTCCGGCA AGTCGACGCT CTTGCGGATC
ATCTCAGGCC TCGCGCAGCC CGGCAGCGGA GAGGCCCTTT ACTGCGGCAA ACCTATCACC
GGCCCCACGC AGGGGCTCGC CATGGTGTTC CAGAGCTTCG CCCTTTTCCC TTGGCTCACC
GTGCTGGAAA ACGTGGAGCT TGGGCTCGAC GCCATGGGGG TGCCGCAGGC CGAACGCAGA
AGGCGCGCAC TGGAGGCGAT CGACCTGATC GGCCTGGACG GCTTCGAATC CGCCTACCCG
AAGGAACTCT CCGGCGGAAT GCGGCAGCGG GTAGGTTTCG CCCGGGCGCT GGTCGTCGAG
CCGACGCTTC TTTTGATGGA TGAGCCTTTC TCTGCGCTCG ACGTCCTCAC CGCGGAGACG
CTTCGCACCG ACCTGATCGA GCTCTGGCTG GAGCGGCGCA TCCCGACGAA AGGGATACTG
CTGGTATCCC ACAACATCGA GGAGGCGGTC CTTCTGGCGG ACCGGATCAT CATCCTCGGG
AGCAACCCCG GCCGCGTCGT CTCCGAGATC AAGATTCCGC TCGCCCATCC CCGCGACCGC
GACGCCCCTC TTTTCAGGCA ATTGGTCGAC ACGGTGTACG GCCAGATGAC CCAGCGCTCC
CGCGCCGCCG GCAAGGTGGA GGCGGTCCCC ATCTCTTACC TCCTACCAGA GGCGCACGTG
AACCAGCTCT CCGGCCTTTT GGAGGCGCTG GCCGCCGAAC CGTACAACGG CAAGGCCGAC
CTCCCCGAAC TCGCCGACCA GATGGGTTTC GGTGTGGACC AGCTCTTCCC GCTTCTGGAG
GCGCTCGACA TACTCAACCT GGCCCGCATC GAAGGCGGTG ACGCCGACCT CACCGCCTCC
GGCAGGAGTT ACGTCGACGC CGACATCCTG CGCCGCAAGG AGATCTTCGC CGAGCATCTG
GTGCGGCACG TAGCACTTGC CGCCCACATC CGGCGCGTGC TCGACGACCG GCCGGGAAAC
CGCGCCAAGG AAGACCGATT CCTGCGCGAA CTGGAAGACT TCTTCAGCGA AGAGACCGCG
GAGACGGTGC TGCAGGTAGC CATCGAGTGG GGGCGCTACG CCGAGCTCTT CGCCTACGAC
GAGGGCTCGG GCATCCTCAG CCTGGAGAAC CCCGCCAGCG GCGAGCAGGG GTAA
|
|---|
| Protein sequence | MEATDNKVPL LKLSNIRKSY KKSDSGEHLV LDGVNLTIAD GEIVALLGRS GSGKSTLLRI
ISGLAQPGSG EALYCGKPIT GPTQGLAMVF QSFALFPWLT VLENVELGLD AMGVPQAERR
RRALEAIDLI GLDGFESAYP KELSGGMRQR VGFARALVVE PTLLLMDEPF SALDVLTAET
LRTDLIELWL ERRIPTKGIL LVSHNIEEAV LLADRIIILG SNPGRVVSEI KIPLAHPRDR
DAPLFRQLVD TVYGQMTQRS RAAGKVEAVP ISYLLPEAHV NQLSGLLEAL AAEPYNGKAD
LPELADQMGF GVDQLFPLLE ALDILNLARI EGGDADLTAS GRSYVDADIL RRKEIFAEHL
VRHVALAAHI RRVLDDRPGN RAKEDRFLRE LEDFFSEETA ETVLQVAIEW GRYAELFAYD
EGSGILSLEN PASGEQG
|
|---|
| |