| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0412 |
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| Symbol | |
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| ID | 6783238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 488542 |
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| End bp | 489624 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642766380 |
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| Product | ribonuclease Z |
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| Protein accession | YP_002137237 |
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| Protein GI | 197116810 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.739241 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCAAAC CTTTTCGCTA CCTGGAACCC ACCTTTTTTG CCGGTCTCTT TGACGACCCG
CTGCTTTTGG TTCGCGTGCG CCCTACCGGA CGTGCTCTTC TCTTCGACTG CGGCAAGATG
CACCACCTAG CCAAGAGGGT CTACACCTCC ATCGACGCCA TATTCATCAG CCACGCCCAC
ATGGACCATT TCATGGGGAT GGACAGCGTT GTCCGCCACA GCCACGCCTC TCCCCGCACT
ATCGACGTCT TCGGTCCTCC GGGTCTTGCG GCTCGCATGG GTCACAAGTT CTCCTGCTAC
GATTGGAACC TCGCCGACAC CTTCTGGGGC AACTTCAGGG TAAGCGAGAT AGACGACGGC
CGGATCAGCA GCACGCTTTT TAGCGGCCCC GATGCCTTCG CCGCCAGCAG GGAAGGGGAG
CGCTCCGGCG TCCTTTACAG CAACAGGCAC CTCACCGTGA CCAGCGCGCA GTGCGAGCAC
AGGATACCCG TCCTCGCCTA CAAGGTGGAA GAAGGCGCTG CCTTCGTGAT TGACGACGAA
CGGATGGCCG AAGCGTGCGT CAGAAAAGGC GCGTGGCTGA AGGATCTGGA GAAGCTCTTT
CGTGATGGGG AAATGAAGGG GAACCCGGTA AGGCATCTCT GTGTCAGCGG AGAAGAAGTG
GAAGAACGAC TGGAACCCGA TGCCGCGGCA CTGTATCAGC GGATCAGGAA GTTCGAGGAA
CCCGCGAGCA TCGGCTATGT CACCGACATC GGGTACTCAG AGGAAAACAT GGCGAGCCTG
GAAGGATTGG TAAAGGGAGT GACGCTTCTT GTCTGTGAGT GCGCTTTCCT CGCCTCCGAG
CAAACCAAGG CGCGGCTTTC AAGGCACATG AGCACCGCCG ATTTCAACAT GATGTTGGAC
CGGCTGCGCC CCAAGTACGT GTTGCCGATG CACTTCTCCA AGACCTATCA GCGTGGAAGC
GAGCCCCTGT ACCGGGAGAT AGAGCCGCCG CCGGGAGTAA CAGTGTTGAA GATCCCCGAC
CGCCTGACCC CCCGCCCGAT CATGGAAAGC GAGGTGCCGA GGCCGGTGGA ACTAAAAACC
TGA
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| Protein sequence | MPKPFRYLEP TFFAGLFDDP LLLVRVRPTG RALLFDCGKM HHLAKRVYTS IDAIFISHAH
MDHFMGMDSV VRHSHASPRT IDVFGPPGLA ARMGHKFSCY DWNLADTFWG NFRVSEIDDG
RISSTLFSGP DAFAASREGE RSGVLYSNRH LTVTSAQCEH RIPVLAYKVE EGAAFVIDDE
RMAEACVRKG AWLKDLEKLF RDGEMKGNPV RHLCVSGEEV EERLEPDAAA LYQRIRKFEE
PASIGYVTDI GYSEENMASL EGLVKGVTLL VCECAFLASE QTKARLSRHM STADFNMMLD
RLRPKYVLPM HFSKTYQRGS EPLYREIEPP PGVTVLKIPD RLTPRPIMES EVPRPVELKT
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