Gene Gbem_0400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_0400 
Symbol 
ID6783226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp475972 
End bp476847 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content64% 
IMG OID642766368 
Productlipoyl synthase 
Protein accessionYP_002137225 
Protein GI197116798 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0320] Lipoate synthase 
TIGRFAM ID[TIGR00510] lipoate synthase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCCGA TCAGAAAACC TGCTTGGCTG CAAAAGAAGA TCATCCCCGC GGCCCATGCG 
GAGATGGAGG GGCTTTTAAA GGAGCTGCGC CTGAACACGG TGTGCCAGCA GGCGCGCTGC
CCCAACATCA CCGAATGCTT CGGAAAGCGC CAGGCGACCT TCCTCATCCT CGGGCGCATC
TGCACGCGTC TCTGCTCATT TTGTTCCGTC TCCAAGGAGA CCCCGCTTCC CTTGGAACCG
GGGGAAGCGG CTTCGGTCGC TGAAGCGGTC AAGCGGCTGG GGCTCTCCCA CGTGGTTATT
ACCAGCCCCA CCCGCGACGA TCTTCCCGAC GGCGGCGCCT CCGTCTATGC CGAAACCGTG
GCGCGGATCC GGAGCGTTTC CCCTGCGACG AAGGTCGAGC TGCTGATCCC CGACTTCCGT
GGTGATTGGG CCGCCCTGGC CGCCGTGGTC GAGAGCGCGC CCGACATCCT GGGGCATAAC
CTGGAGACGG TGCCGCGGCT TTACTCCATC CGCAGCGGCG CGGACTACAG AAGGTCTCTG
GATTTGCTGG CACAGGCGCG CCGGATGGCC CCCGGCCTCA ACACCAAGTC CGGCCTCATG
CTGGGCCTCG GGGAAGAGGA AGCGGAACTG TTCGCCGTTA TGGAAGACCT GCTGAAGGCG
GGATGCGGGT ACCTGAGCCT GGGGCAATAT CTTGCGCCCA GCCGGATGCA TCACCCGGTG
CAGCGGTACG TCGAGCCCGA ACTGTTCGAA CGTTACAAGG AGAGGGCGCT GACGATGGGA
TTCGAGCACG TCGAGAGCGC CCCCTACGTT AGAAGCAGCT ACCACGCGGA GAATTATCTG
GAGTCCAAGT TCCCGCCCCC GGAGGGGGAG GGTTAG
 
Protein sequence
MDPIRKPAWL QKKIIPAAHA EMEGLLKELR LNTVCQQARC PNITECFGKR QATFLILGRI 
CTRLCSFCSV SKETPLPLEP GEAASVAEAV KRLGLSHVVI TSPTRDDLPD GGASVYAETV
ARIRSVSPAT KVELLIPDFR GDWAALAAVV ESAPDILGHN LETVPRLYSI RSGADYRRSL
DLLAQARRMA PGLNTKSGLM LGLGEEEAEL FAVMEDLLKA GCGYLSLGQY LAPSRMHHPV
QRYVEPELFE RYKERALTMG FEHVESAPYV RSSYHAENYL ESKFPPPEGE G