| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0361 |
|---|
| Symbol | |
|---|
| ID | 6783187 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 439309 |
|---|
| End bp | 440115 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642766330 |
|---|
| Product | PP-loop domain protein |
|---|
| Protein accession | YP_002137188 |
|---|
| Protein GI | 197116761 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1606] ATP-utilizing enzymes of the PP-loop superfamily |
|---|
| TIGRFAM ID | [TIGR00268] conserved hypothetical protein TIGR00268 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0101562 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACTG CCCAGGACAA GTACTTGAAG TTGCAGGAAA TCCTGCGCGA AATGGGGTCG
CTCTTGGTCG CTTTTTCGGG CGGCGTCGAC TCTACCTTTC TTCTTAAGGC CGCCTTCGAC
ACCTTGGGCG CAGAACGGGT GTTAGCGGTC ACCGCCACCT CCCCGACCTA TCCCGAATCT
GAACTCGCCG AGGCGAAGAG GCTCGCGACC CGGATCGGAG CCCGCCAGGA GCTCGTGGTC
TCCAACGAAC TGGAGATACC CGGCTTCCGC CACAACCCCA AGGACCGCTG CTACCACTGC
AAAAGCGAGT TGTTCCGGAT CTGCACGGAG AAGGCGCGCG ACAACGGGTT TGCCTTCGTC
GCCGACGGGA GCAACACAGA CGATCTGGGC GACTACCGCC CCGGCCGCAC CGCCGCCTGT
GAACTGAAGG TGCGTTCGCC GCTTCTGGAA GCTGGCCTCT CCAAAGGGGA TATTCGCGAG
TTGAGCCGCG GGCTCGGGCT CCCCACCTGG GACAAGCAGG CCTATGCCTG CCTGGCCAGC
CGTTTCCCCT ATGGGACCGA GATCACCGAG CAGAGGCTGA ACCAGGTGGA GCGCTGCGAG
GAGTTCTTGA AGGGGGAGGG GTTCACCGTG TATCGGGTGA GGTTTCACTT GGAGAGTGCG
CGCATCGAAT TGAGCGAGGC GGAACTGCCG CGCATGCTGG AGCCCTCCCT CAGGGGGAGG
ACCATTGAGT TTTTCCGCGC CGCCGGATTC ACTTATGTGT CGCTGGACCT GCAGGGGTAT
CGTACCGGGA GCATGAACGA GGGGTAG
|
|---|
| Protein sequence | MQTAQDKYLK LQEILREMGS LLVAFSGGVD STFLLKAAFD TLGAERVLAV TATSPTYPES
ELAEAKRLAT RIGARQELVV SNELEIPGFR HNPKDRCYHC KSELFRICTE KARDNGFAFV
ADGSNTDDLG DYRPGRTAAC ELKVRSPLLE AGLSKGDIRE LSRGLGLPTW DKQAYACLAS
RFPYGTEITE QRLNQVERCE EFLKGEGFTV YRVRFHLESA RIELSEAELP RMLEPSLRGR
TIEFFRAAGF TYVSLDLQGY RTGSMNEG
|
|---|
| |