Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_0345 |
Symbol | |
ID | 6783171 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 424197 |
End bp | 427421 |
Gene Length | 3225 bp |
Protein Length | 1074 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642766314 |
Product | exodeoxyribonuclease V, gamma subunit |
Protein accession | YP_002137172 |
Protein GI | 197116745 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1330] Exonuclease V gamma subunit |
TIGRFAM ID | [TIGR01450] exodeoxyribonuclease V, gamma subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGCTGA AGATATATAC CAGCAACCGC ATGGAACGCC TGGTGGACGA GCTGGAAAGG GTGGTCCGCG CCCCCCGTCC CGCCCCCTGC ACCCCCTTCG ACAAGGAACT GGTCGTGGTG CAGAACAAGG GGATGCAGCG CTGGCTCTCC ATGGAACTTG CCACCCGCAT CGGCGTCTGG GCCAACGGCG ACTTCCTCTT TCCCAACAAG TTCGTGGAAG AGGTCTTCGC CTACGTGCTC CCGGAGAGCC CCGCGGACGC TCCGCTCTTC GCCCCGGAGG TGATGACCTG GAGGATCCTG GAGCTGCTGC AGCAGTCCGC CGGAAGAGCC GGCTTCGAGG AGGTCGCCGG GTACCTCGCG GACGACGGTG ACGGCCTCAA GCGGATGCAG TTGGCCCGGC GCATTTCAGA CACCTTCGAC CGGTACACCA TCTACCGTCC CAAAGAGCTG CTCCGCTGGG AGCAGGGGGA AGAGGAGCAC TGGCAGGCGC AGCTCTGGCG GGCTCTCAAC GACCGCGCCG GCCAAAAGCA CCGCGCCCGG CTGCTGCACG ACTTCCTCGC TTCCCGCAAA AATGACCGGT CCTGGCGGCG GCGCATCTCG GTGATCGGCA TTCCCTCGCT TCCCCCCTTC CACCTCGACG TACTTGCCAA GGTGGCGGAG CACGCCGAGG TCAACCTGTT CCTCTTGAAC CCCTGCCGCC AGTACTGGGG CGAGATCGTC TCCGAGCGGG AGCTGGCCCG GCTGGAGAAG CACGGCCAGG GGGAGGAGCA GTGGTACGAG ACCGGGAACC CGCTCCTTGC CTCGTGGGGG AAGCTCGGCC GCGACTTCTT CAAGGCGATC ATCGACGACT GCGGCGACCA CGAGAGGGAG GACAGCTTCT ACGAGCTTCC GCAGGGGGTG CTGCTGCACG AGGTCCAGGC GGATATCGTG GAATTGCGGG GCGCCGAGGC GGGGCCGCGC CAGGTGCAGG CGGGCGACCT CTCCCTCAAG ATCCATTCCT GCCACTCCCC GATGCGCGAG GTGGAGGTCC TGTACGACAC CCTTCTCTCC CTCTTCGACG CCGACCCCCT GCTGTCCCCC CGCGACGTGC TGGTGATGAC CCCGGATATC GAAGCTTACG CCCCCTACAT CTCCGCGGTC TTCGACAATC CGGAAGAAGA TCGCAAGCGC ATCCCCTATT CCATCGCGGA CAGAAGCCTG AAGAACGAGG GGGAAGCAGC CCGTGCCCTT GTCGCCATCC TCGGGCTTTG CGGCGGCCGC TACGGCGTGG CGACCGTGCT GGACATCCTG GAGTCCCCTC CGGTAGCGCG CCGGTTCGGG CTCTCCGGCG ACGACCTGGA AAACGTGCGG GACTGGCTCA GGGGGGCCAA CATCAGGTGG GGCATCGACG CCTCCCAGCG CGCGGAGCAC GGCGTCCCCC CTTTCAGCGA AAACTCGTGG GCAGCGGGGC TCGACCGGCT GCTTTTGGGC TACGCCATGA ACGGCGACGG GCGCTCGTTC TATAACGGCA TACTCCCCTA CGACGACATG GAGGGTGGCG TGGCGCTCTC CTTCGGGCGC TTCCTCACCT TCTGCGAAAA GCTTTTCGCC CAAACCGGGG CGCTTTCCCG TCCGCGCGTG CCGTCCGAGT GGGTGCCTGC GCTGCGCCAG ATCCTGGACG ACTTCATCCT CCCGGACCAG GAAGGGGAGC GCGAGTTCCT CCTCCTGATA GAGATGGCGA AGAAACTGGG GGAGTTTCCC GCTGCGGCCG GTTTCGAGGA AGAGATCGGC ATCGAGGTGG TGCGCTACTG GGTCGAGCAG CAGTTGGGGG CCTCGAAAAG GGACCTCGGC TTTCTCACCG GCAACGTCAC CTTCTGCGCC ATGCTCCCGA TGCGGAGCAT CCCCTTTCCG GTGGTCGCCT TGTTGGGGAT GAACGAGGGG GAATTCCCGC GCCGCAACCC GCCCCAGGGG TTCGACCTGA TGACCAGGGA GCCGCGCTCC GGCGACTCGT CCCCGCGGGA CGAGGACCGC TACCTCTTCC TGGAGGCCCT CCTCTCCGCC CGCAAGAGGC TGCATATAAG CTACGTGGGG CAGAGCATCA AGGACAACGC CGAACTCCCC CCGAGCGTGC TCGTGAGCGA ACTTCTGGAC TACCTGGAAC GCGCTTTCGT TACGCCTGAG GGTAAGCCGG CCGCAGAAGT AGCGCGCCAT CCGCTGCAGC CTTTCAGTCT CCAATACTTC AACCGCGACT CCGCACTTTT CAGCTACTCG CAGCAAAACT GCGAGGGGGC GAAAGCAAAG CTCTCCTCCC CCACTCCACG GGAGCCGTTT CTGGATGCGC CCCTTCCCGC CTGGGAGGAA GAAGGGACCG TCACGCTCAA GACGCTGATC GATTTCCTCT GCAACCCCGC CAAGGAGCTG TTGCGGCGCC GGCTCGGCAT CCGCATCGAG CAGGGGGTGG AGCCGCTAGA GGAATCGGAG CCCTTCGCGC TGGATACCCT CGCCAAGTAC CAACTGGAGC AGGAGATGGT CACGGCCCTC CTGCGCGGAG AGGAGCTCGA CACCCCTTAC GCCGTCGCCT GCGCGCGCGG CGACCTTCCT CCCGGAGTCT GCGGCTCGGC CCTTTTCCGC AAGCTCGGCG AACCCGCTCA GGAGTTCGCC GCCAAGGTGG TCGAGGCGTC GGACGGTGAG CCGCTCCCTC CCCTGGACAT CGACCTGGTA CTTCCCGGCG GGAGGATCAT CGGGCGCATC GAAAACCTAC GCACCGACCG GATGGTGCGC TACCGCTACA CCAAGCTGAA GGCGAAAGAC CAGCTGCGGC TCTGGGTCGA GCACCTGGCG CTCAACTGCG CGAAGGCCGA AGGGTATCCG CTGGAAAGCA GCTTCGTCGC CTCGGACAGC ACCATCCACC TCCCCCCCGT CGAGGCATGC ACGGAGCACC TGGACCGGCT CCTGGAGCTG TACCGAATGG GAATGACCTG CCCGCTCAAG TTCTTCCCGG AGAGCTCCCT GGAGTACGCC AAGAAATCGC GCGACCCGAA GAAGGCGGCG AAGGCGCTCG CCGATGCGCT GGGCAAGTGG CACGGCAGCG AATTTTACGA GGGCGAGGGA AAGGACGAGC ACTGCCGCCG CTGCTTCGGC GATGACGCGC CGCTGGACGA GGAGTTCGCA ACCCTGGCGC TCCAGGTATG GGAGCCGCTT CTGGAGCTCC AGAAGGCCAA GGGGAAGGGC AAAGACAGAC TCTGA
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Protein sequence | MPLKIYTSNR MERLVDELER VVRAPRPAPC TPFDKELVVV QNKGMQRWLS MELATRIGVW ANGDFLFPNK FVEEVFAYVL PESPADAPLF APEVMTWRIL ELLQQSAGRA GFEEVAGYLA DDGDGLKRMQ LARRISDTFD RYTIYRPKEL LRWEQGEEEH WQAQLWRALN DRAGQKHRAR LLHDFLASRK NDRSWRRRIS VIGIPSLPPF HLDVLAKVAE HAEVNLFLLN PCRQYWGEIV SERELARLEK HGQGEEQWYE TGNPLLASWG KLGRDFFKAI IDDCGDHERE DSFYELPQGV LLHEVQADIV ELRGAEAGPR QVQAGDLSLK IHSCHSPMRE VEVLYDTLLS LFDADPLLSP RDVLVMTPDI EAYAPYISAV FDNPEEDRKR IPYSIADRSL KNEGEAARAL VAILGLCGGR YGVATVLDIL ESPPVARRFG LSGDDLENVR DWLRGANIRW GIDASQRAEH GVPPFSENSW AAGLDRLLLG YAMNGDGRSF YNGILPYDDM EGGVALSFGR FLTFCEKLFA QTGALSRPRV PSEWVPALRQ ILDDFILPDQ EGEREFLLLI EMAKKLGEFP AAAGFEEEIG IEVVRYWVEQ QLGASKRDLG FLTGNVTFCA MLPMRSIPFP VVALLGMNEG EFPRRNPPQG FDLMTREPRS GDSSPRDEDR YLFLEALLSA RKRLHISYVG QSIKDNAELP PSVLVSELLD YLERAFVTPE GKPAAEVARH PLQPFSLQYF NRDSALFSYS QQNCEGAKAK LSSPTPREPF LDAPLPAWEE EGTVTLKTLI DFLCNPAKEL LRRRLGIRIE QGVEPLEESE PFALDTLAKY QLEQEMVTAL LRGEELDTPY AVACARGDLP PGVCGSALFR KLGEPAQEFA AKVVEASDGE PLPPLDIDLV LPGGRIIGRI ENLRTDRMVR YRYTKLKAKD QLRLWVEHLA LNCAKAEGYP LESSFVASDS TIHLPPVEAC TEHLDRLLEL YRMGMTCPLK FFPESSLEYA KKSRDPKKAA KALADALGKW HGSEFYEGEG KDEHCRRCFG DDAPLDEEFA TLALQVWEPL LELQKAKGKG KDRL
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