Gene Gbem_0345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_0345 
Symbol 
ID6783171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp424197 
End bp427421 
Gene Length3225 bp 
Protein Length1074 aa 
Translation table11 
GC content66% 
IMG OID642766314 
Productexodeoxyribonuclease V, gamma subunit 
Protein accessionYP_002137172 
Protein GI197116745 
COG category[L] Replication, recombination and repair 
COG ID[COG1330] Exonuclease V gamma subunit 
TIGRFAM ID[TIGR01450] exodeoxyribonuclease V, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCTGA AGATATATAC CAGCAACCGC ATGGAACGCC TGGTGGACGA GCTGGAAAGG 
GTGGTCCGCG CCCCCCGTCC CGCCCCCTGC ACCCCCTTCG ACAAGGAACT GGTCGTGGTG
CAGAACAAGG GGATGCAGCG CTGGCTCTCC ATGGAACTTG CCACCCGCAT CGGCGTCTGG
GCCAACGGCG ACTTCCTCTT TCCCAACAAG TTCGTGGAAG AGGTCTTCGC CTACGTGCTC
CCGGAGAGCC CCGCGGACGC TCCGCTCTTC GCCCCGGAGG TGATGACCTG GAGGATCCTG
GAGCTGCTGC AGCAGTCCGC CGGAAGAGCC GGCTTCGAGG AGGTCGCCGG GTACCTCGCG
GACGACGGTG ACGGCCTCAA GCGGATGCAG TTGGCCCGGC GCATTTCAGA CACCTTCGAC
CGGTACACCA TCTACCGTCC CAAAGAGCTG CTCCGCTGGG AGCAGGGGGA AGAGGAGCAC
TGGCAGGCGC AGCTCTGGCG GGCTCTCAAC GACCGCGCCG GCCAAAAGCA CCGCGCCCGG
CTGCTGCACG ACTTCCTCGC TTCCCGCAAA AATGACCGGT CCTGGCGGCG GCGCATCTCG
GTGATCGGCA TTCCCTCGCT TCCCCCCTTC CACCTCGACG TACTTGCCAA GGTGGCGGAG
CACGCCGAGG TCAACCTGTT CCTCTTGAAC CCCTGCCGCC AGTACTGGGG CGAGATCGTC
TCCGAGCGGG AGCTGGCCCG GCTGGAGAAG CACGGCCAGG GGGAGGAGCA GTGGTACGAG
ACCGGGAACC CGCTCCTTGC CTCGTGGGGG AAGCTCGGCC GCGACTTCTT CAAGGCGATC
ATCGACGACT GCGGCGACCA CGAGAGGGAG GACAGCTTCT ACGAGCTTCC GCAGGGGGTG
CTGCTGCACG AGGTCCAGGC GGATATCGTG GAATTGCGGG GCGCCGAGGC GGGGCCGCGC
CAGGTGCAGG CGGGCGACCT CTCCCTCAAG ATCCATTCCT GCCACTCCCC GATGCGCGAG
GTGGAGGTCC TGTACGACAC CCTTCTCTCC CTCTTCGACG CCGACCCCCT GCTGTCCCCC
CGCGACGTGC TGGTGATGAC CCCGGATATC GAAGCTTACG CCCCCTACAT CTCCGCGGTC
TTCGACAATC CGGAAGAAGA TCGCAAGCGC ATCCCCTATT CCATCGCGGA CAGAAGCCTG
AAGAACGAGG GGGAAGCAGC CCGTGCCCTT GTCGCCATCC TCGGGCTTTG CGGCGGCCGC
TACGGCGTGG CGACCGTGCT GGACATCCTG GAGTCCCCTC CGGTAGCGCG CCGGTTCGGG
CTCTCCGGCG ACGACCTGGA AAACGTGCGG GACTGGCTCA GGGGGGCCAA CATCAGGTGG
GGCATCGACG CCTCCCAGCG CGCGGAGCAC GGCGTCCCCC CTTTCAGCGA AAACTCGTGG
GCAGCGGGGC TCGACCGGCT GCTTTTGGGC TACGCCATGA ACGGCGACGG GCGCTCGTTC
TATAACGGCA TACTCCCCTA CGACGACATG GAGGGTGGCG TGGCGCTCTC CTTCGGGCGC
TTCCTCACCT TCTGCGAAAA GCTTTTCGCC CAAACCGGGG CGCTTTCCCG TCCGCGCGTG
CCGTCCGAGT GGGTGCCTGC GCTGCGCCAG ATCCTGGACG ACTTCATCCT CCCGGACCAG
GAAGGGGAGC GCGAGTTCCT CCTCCTGATA GAGATGGCGA AGAAACTGGG GGAGTTTCCC
GCTGCGGCCG GTTTCGAGGA AGAGATCGGC ATCGAGGTGG TGCGCTACTG GGTCGAGCAG
CAGTTGGGGG CCTCGAAAAG GGACCTCGGC TTTCTCACCG GCAACGTCAC CTTCTGCGCC
ATGCTCCCGA TGCGGAGCAT CCCCTTTCCG GTGGTCGCCT TGTTGGGGAT GAACGAGGGG
GAATTCCCGC GCCGCAACCC GCCCCAGGGG TTCGACCTGA TGACCAGGGA GCCGCGCTCC
GGCGACTCGT CCCCGCGGGA CGAGGACCGC TACCTCTTCC TGGAGGCCCT CCTCTCCGCC
CGCAAGAGGC TGCATATAAG CTACGTGGGG CAGAGCATCA AGGACAACGC CGAACTCCCC
CCGAGCGTGC TCGTGAGCGA ACTTCTGGAC TACCTGGAAC GCGCTTTCGT TACGCCTGAG
GGTAAGCCGG CCGCAGAAGT AGCGCGCCAT CCGCTGCAGC CTTTCAGTCT CCAATACTTC
AACCGCGACT CCGCACTTTT CAGCTACTCG CAGCAAAACT GCGAGGGGGC GAAAGCAAAG
CTCTCCTCCC CCACTCCACG GGAGCCGTTT CTGGATGCGC CCCTTCCCGC CTGGGAGGAA
GAAGGGACCG TCACGCTCAA GACGCTGATC GATTTCCTCT GCAACCCCGC CAAGGAGCTG
TTGCGGCGCC GGCTCGGCAT CCGCATCGAG CAGGGGGTGG AGCCGCTAGA GGAATCGGAG
CCCTTCGCGC TGGATACCCT CGCCAAGTAC CAACTGGAGC AGGAGATGGT CACGGCCCTC
CTGCGCGGAG AGGAGCTCGA CACCCCTTAC GCCGTCGCCT GCGCGCGCGG CGACCTTCCT
CCCGGAGTCT GCGGCTCGGC CCTTTTCCGC AAGCTCGGCG AACCCGCTCA GGAGTTCGCC
GCCAAGGTGG TCGAGGCGTC GGACGGTGAG CCGCTCCCTC CCCTGGACAT CGACCTGGTA
CTTCCCGGCG GGAGGATCAT CGGGCGCATC GAAAACCTAC GCACCGACCG GATGGTGCGC
TACCGCTACA CCAAGCTGAA GGCGAAAGAC CAGCTGCGGC TCTGGGTCGA GCACCTGGCG
CTCAACTGCG CGAAGGCCGA AGGGTATCCG CTGGAAAGCA GCTTCGTCGC CTCGGACAGC
ACCATCCACC TCCCCCCCGT CGAGGCATGC ACGGAGCACC TGGACCGGCT CCTGGAGCTG
TACCGAATGG GAATGACCTG CCCGCTCAAG TTCTTCCCGG AGAGCTCCCT GGAGTACGCC
AAGAAATCGC GCGACCCGAA GAAGGCGGCG AAGGCGCTCG CCGATGCGCT GGGCAAGTGG
CACGGCAGCG AATTTTACGA GGGCGAGGGA AAGGACGAGC ACTGCCGCCG CTGCTTCGGC
GATGACGCGC CGCTGGACGA GGAGTTCGCA ACCCTGGCGC TCCAGGTATG GGAGCCGCTT
CTGGAGCTCC AGAAGGCCAA GGGGAAGGGC AAAGACAGAC TCTGA
 
Protein sequence
MPLKIYTSNR MERLVDELER VVRAPRPAPC TPFDKELVVV QNKGMQRWLS MELATRIGVW 
ANGDFLFPNK FVEEVFAYVL PESPADAPLF APEVMTWRIL ELLQQSAGRA GFEEVAGYLA
DDGDGLKRMQ LARRISDTFD RYTIYRPKEL LRWEQGEEEH WQAQLWRALN DRAGQKHRAR
LLHDFLASRK NDRSWRRRIS VIGIPSLPPF HLDVLAKVAE HAEVNLFLLN PCRQYWGEIV
SERELARLEK HGQGEEQWYE TGNPLLASWG KLGRDFFKAI IDDCGDHERE DSFYELPQGV
LLHEVQADIV ELRGAEAGPR QVQAGDLSLK IHSCHSPMRE VEVLYDTLLS LFDADPLLSP
RDVLVMTPDI EAYAPYISAV FDNPEEDRKR IPYSIADRSL KNEGEAARAL VAILGLCGGR
YGVATVLDIL ESPPVARRFG LSGDDLENVR DWLRGANIRW GIDASQRAEH GVPPFSENSW
AAGLDRLLLG YAMNGDGRSF YNGILPYDDM EGGVALSFGR FLTFCEKLFA QTGALSRPRV
PSEWVPALRQ ILDDFILPDQ EGEREFLLLI EMAKKLGEFP AAAGFEEEIG IEVVRYWVEQ
QLGASKRDLG FLTGNVTFCA MLPMRSIPFP VVALLGMNEG EFPRRNPPQG FDLMTREPRS
GDSSPRDEDR YLFLEALLSA RKRLHISYVG QSIKDNAELP PSVLVSELLD YLERAFVTPE
GKPAAEVARH PLQPFSLQYF NRDSALFSYS QQNCEGAKAK LSSPTPREPF LDAPLPAWEE
EGTVTLKTLI DFLCNPAKEL LRRRLGIRIE QGVEPLEESE PFALDTLAKY QLEQEMVTAL
LRGEELDTPY AVACARGDLP PGVCGSALFR KLGEPAQEFA AKVVEASDGE PLPPLDIDLV
LPGGRIIGRI ENLRTDRMVR YRYTKLKAKD QLRLWVEHLA LNCAKAEGYP LESSFVASDS
TIHLPPVEAC TEHLDRLLEL YRMGMTCPLK FFPESSLEYA KKSRDPKKAA KALADALGKW
HGSEFYEGEG KDEHCRRCFG DDAPLDEEFA TLALQVWEPL LELQKAKGKG KDRL