| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0277 |
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| Symbol | |
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| ID | 6783103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 334026 |
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| End bp | 336461 |
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| Gene Length | 2436 bp |
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| Protein Length | 811 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642766246 |
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| Product | homocysteine S-methyltransferase |
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| Protein accession | YP_002137104 |
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| Protein GI | 197116677 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase
[TIGR02370] methyltransferase cognate corrinoid proteins, Methanosarcina family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.357222 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTTTTA TGCAGGCGGT TAAAGAGCGG GTGCTGGTTC TGGACGGCGC CATGGGGACC
ATGCTGCAGG AACGCGGGCT GAAGCCGGGG CAGTCCCCGG AGGAGATGAA CCTCACCGCA
GCCGACGTGG TCGCCGGGGT GCACCAGGCT TATCTGGACG CCGGCGCCGA CATCATCGTC
ACCAACACCT TCGGCGGGAC CAAGGCGAAG CTGGAACATT ACGGCCTCGG CGACCAAGTG
GCGCGCATCA ACGCCGAGGC GGTGAGGATC GCCCGCGAGG TGGCTGGCGA AAAGGCCTAC
GTGGCAGGTT CCATCGGCCC CACCGGCCGC TTCCTGGAGC CGGTCGGCGA CATGAGCTTC
GACGAGGCAG TCTCGCTTTT CCGCGAGCAG GCACAGGCGC TCGTCGACGC CGGCTGCGAC
CTGATCAGCT TCGAAACCTT CCTCGACATC AAGGAGATCC GCGCCGGTGT CATCGCGGTG
CGCGAGATCT CCAAGGAGAT CCCGGTCATC GCCATGCTCA CCTTCGAGGA GAAGGGGAGA
AGCGTCCTCG GCACCCCGCC CGAGGCTGCC GCCATCACCC TGGAGGCGGT GGGCGCGACC
ATCGTCGGCT CCAACTGCGG CTTAGGCCCT GAAGGGATCT ACCAGATCCT CTCCGGCATG
AGGGAGGTCA CCGCGCTCCC GCTCATCTCC CAGGCGAACG CGGGGCTCCC GATCCTCAAG
GACGGAGTCA CAATCTTCCC GGCGACCCCG GACGAGATGA CTTCCTACCA CGACCGGCTG
ATCGAACTCG GCGTCCGCAT CATCGGCGGC TGCTGCGGCA CCACCCCCGC CCACATCGCC
GCCATCAAGA AAGCGCTCGC CGCGAAGCAG ACTCCCTTCG TCCCCAAGAA GGAGGACGGC
ACCACCTGGC TCTCCAGCCG CGGCAGCTTC GCCGCAGTCG GCTCCGCCCA TCCGGTGGCG
CTCATCGGCG AGCGCATCAA CCCGACCGGC AAAAAGCTCT ACTCGCAGGA ACTCAGGGAA
GGGAAGGTGA GCTACATCCG GCGCGAGGCG CTGGAGCAGA CCGGGCTCGG CGCGACGCTT
CTCGACGTGA ACGTCGGCAC CCCGGGGATC GACGAGCCGG CCGCCATGGA ACGCGCCGTC
TTCTGCATCA CCGGCGCAGT CCAGACGCCG CTGGTACTCG ACTCATCCTC CCCTGCCGCC
CTGGAGGCGG GGCTTAAGGC CGCCGACGGC AAGGTGCTCA TCAACTCGGT GAACGGCGAA
GAAAAGAGCC TCGCCGCCGT CCTCCCCCTG GCCAAGAAGT ACGGCGCGGC GCTGGTCTGC
CTCACGCTGG ACGAGGCGGG GATCCCTGCG GAGGCTGCGG GGCGGGTCGC CGTCGCCGAG
AAGATCGCCG CTGCCGCTAA GGCCGCAGGG GTGAAAAGAA GCGATCTCGT GGTCGACTGC
CTCACCCTGA CGGTGAGCGC CGAGCCCAAG GGGGCGCTGG TGGCGCTGGA AGCGGTGCGC
CAGGTGAGCG CGCTCGGGCT CAACACGACG CTCGGCGTTT CCAACATCTC CTTCGGCCTT
CCCTGCCGCC CCCTCATCTC CTCCACCTTC TTCTCCTTGG CCATGGCCGC CGGGCTCACC
TCGGCCATCG TCAACGTGAA GGAGGCGCCG ATGATGGCGG CCTGGAGAAG CTCCATGGTG
CTGCTGGAAA AGGACGTCAA CGCGGCCTGT TACATCGAGG CCTACAAGGG GCAGGCGGTC
GGCGCCACGG TGGAGCCAGC CGCTGCCGCC GGCGCAACCG GAACCCGGGT CGCAGCCGTC
GAGCCGGAAG GTGTCCGCGG GCGCCTGGCC AAGGCGGTCA TCAACGGCGA AGCGGACAAC
GTGGTGGCGC TGGTGGAAGA GGCGCTGGCC GAGGGGCTGA CCCCGATGCA GATCAGCTCC
GAGGCGCTCC TGGTCGGGCT CGACGAGGTG GGAAAGCGTT TCGGCTCCGG TGAATTCTTC
CTGCCGCAGG TGATGGTCTC AGCCGACACC ATGAAGACCG CTTTCGCCCG GCTGAAGATG
GAACTTTCCA CCGGCGGATT GCAGAGCATC GGCAAGATCC TGATGGCGAC CGTCGAGGGG
GACATTCACG ACATCGGCAA GAACATCCTG GTCACCCTCC TGGAGAACAA CGGTTTCGAG
GTGATAGATC TGGGCAAGAA CGTCCCGGCC GACCGCATCC TGTACGAGGC GCGTGCCCAC
CAGGTGGATG CCGTCGGGCT CTCCGCGCTG ATGACGACGA CCATGGCGCA GATGGACAAG
GTGGTCAAAC TCCTGAAGGC CGAAGGGGTG AAGAGCTTCA CCATGGTCGG CGGGGCCGTG
GTCACCCAGG AATACGCCGA CGAGATCGGC GCCGACCTCT ACGCCAAGGA CGCCATGGAG
GCGGTAGCCC GCATCAAGAA ACTGCTGGCA AAATAA
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| Protein sequence | MPFMQAVKER VLVLDGAMGT MLQERGLKPG QSPEEMNLTA ADVVAGVHQA YLDAGADIIV
TNTFGGTKAK LEHYGLGDQV ARINAEAVRI AREVAGEKAY VAGSIGPTGR FLEPVGDMSF
DEAVSLFREQ AQALVDAGCD LISFETFLDI KEIRAGVIAV REISKEIPVI AMLTFEEKGR
SVLGTPPEAA AITLEAVGAT IVGSNCGLGP EGIYQILSGM REVTALPLIS QANAGLPILK
DGVTIFPATP DEMTSYHDRL IELGVRIIGG CCGTTPAHIA AIKKALAAKQ TPFVPKKEDG
TTWLSSRGSF AAVGSAHPVA LIGERINPTG KKLYSQELRE GKVSYIRREA LEQTGLGATL
LDVNVGTPGI DEPAAMERAV FCITGAVQTP LVLDSSSPAA LEAGLKAADG KVLINSVNGE
EKSLAAVLPL AKKYGAALVC LTLDEAGIPA EAAGRVAVAE KIAAAAKAAG VKRSDLVVDC
LTLTVSAEPK GALVALEAVR QVSALGLNTT LGVSNISFGL PCRPLISSTF FSLAMAAGLT
SAIVNVKEAP MMAAWRSSMV LLEKDVNAAC YIEAYKGQAV GATVEPAAAA GATGTRVAAV
EPEGVRGRLA KAVINGEADN VVALVEEALA EGLTPMQISS EALLVGLDEV GKRFGSGEFF
LPQVMVSADT MKTAFARLKM ELSTGGLQSI GKILMATVEG DIHDIGKNIL VTLLENNGFE
VIDLGKNVPA DRILYEARAH QVDAVGLSAL MTTTMAQMDK VVKLLKAEGV KSFTMVGGAV
VTQEYADEIG ADLYAKDAME AVARIKKLLA K
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