Gene Gbem_0244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_0244 
Symbol 
ID6783069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp287438 
End bp288814 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content63% 
IMG OID642766212 
Productprotease Do 
Protein accessionYP_002137071 
Protein GI197116644 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID[TIGR02037] periplasmic serine protease, Do/DeqQ family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0117444 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGCAG CAATCGTTGC AAGATTTCTG GTACTTAGCG TATTTCTCTC CTCCATTTTC 
TCGACCGTCG CGGGCGCCTC GGTGCTTACT CCCGACTTCG CCAAGCTGGC GAAGAAGCTG
AAGCCCGCGG TGGTCAACAT CAGCACCTCA AAGACCCTAG CGGTGAAGAA GCGGCAGATC
GCCCCAGGGC AAGACCCTTT CCAGGAATAC TTCGACAAAT TTTTCGAGGG GCCGCACCAG
CGTCCGCAAA AGCAGAGGAA CCTGGGGACC GGCTTCATCA TCAGCGACGA CGGCTACATC
ATCACCAACA ACCACGTGGT GAAGGATGCC GACGAGATCA AGGTGAAGCT CTCCGACGGC
AGGGAGTTCG CGGGCGATGT CAAGGGGCGC GACGAAAAGC TGGACCTTGC CCTGGTGAAG
ATCGACGCCA AGGATCACCT CCCCGTGGCG CCTTTGGGGG ACAGCGACAA GATGGAAGTG
GGGGACTGGG TGATGGCTAT CGGCAACCCC TTCGGGCTCT CCCAGACCGT GACGGCAGGG
ATCATCAGCG CCCAGGGGCG CGTGATCGGT TCCGGCCCGT ATGACGACTT CATCCAGACC
GACGCCTCCA TCAACCCCGG CAACTCGGGG GGGCCGCTCT TCAACACCGA AGGGGAGGTG
ATCGGCATAA ATACGGCGAT CGTCGCCGGC GGCCAGGGGA TAGGATTCGC CATACCGGTC
AACATGGCGA AGGAGATCCT CCCGCAGCTG AAGTCTGCGG GCAAGGTGAC CCGCGGCTGG
CTCGGCGTTT CGGTGCAGCT GGTGACCCCG GATCTCGCCA AATCCTTCGG GCTCGACACC
GAGAAGGGGG CGCTGGTTGC CGACGTGGTG AAAGGCAGCC CCGCGGAGAA GGCGGGCCTC
AAGGGGGGCG ACATCATCCT CGAGTACGAC GGGCATCCCA TCAAGGAGAT GGGGGAGCTT
CCGCGCCGCG TAGCCGCCAC CCCGGTAGGA AAGAAGGTGA AAGTGGTGGT GCTGCGCGAG
GGGCGTCAAG AGCCGCTGCA GGTGACCGTC GAGCAGCTGA AGGAGGGCGG CGAGGAGGAT
AGTGCGGTCA CCAGCGACCG GCTCGGGGTG AAGGTGACGG AGCTTACCCC GGAGCGCGCG
CAGCAGTTGC GGCTGCAGGG GGACAAAGGG GTCGTGGTGA CCGATGTGGA GCCGGACAGC
CTTGCCGACC GGGCCGGCAT CCTGGAGGGG GACCTGATCA GGGAGATCAA CGGAGTGCGT
GTAAGCGGCG TGAGCGATTA CAGCAAGTTG ATCGCGGCGG CGAAGAAGGG TGGGTATCTG
AAGATGCTGC TTAGGCGGGG AGAAGCCTCC CTGTTCGTCG CGCTCAGGCT GGAATAG
 
Protein sequence
MQAAIVARFL VLSVFLSSIF STVAGASVLT PDFAKLAKKL KPAVVNISTS KTLAVKKRQI 
APGQDPFQEY FDKFFEGPHQ RPQKQRNLGT GFIISDDGYI ITNNHVVKDA DEIKVKLSDG
REFAGDVKGR DEKLDLALVK IDAKDHLPVA PLGDSDKMEV GDWVMAIGNP FGLSQTVTAG
IISAQGRVIG SGPYDDFIQT DASINPGNSG GPLFNTEGEV IGINTAIVAG GQGIGFAIPV
NMAKEILPQL KSAGKVTRGW LGVSVQLVTP DLAKSFGLDT EKGALVADVV KGSPAEKAGL
KGGDIILEYD GHPIKEMGEL PRRVAATPVG KKVKVVVLRE GRQEPLQVTV EQLKEGGEED
SAVTSDRLGV KVTELTPERA QQLRLQGDKG VVVTDVEPDS LADRAGILEG DLIREINGVR
VSGVSDYSKL IAAAKKGGYL KMLLRRGEAS LFVALRLE