| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0244 |
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| Symbol | |
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| ID | 6783069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 287438 |
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| End bp | 288814 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642766212 |
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| Product | protease Do |
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| Protein accession | YP_002137071 |
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| Protein GI | 197116644 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0117444 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGCAG CAATCGTTGC AAGATTTCTG GTACTTAGCG TATTTCTCTC CTCCATTTTC
TCGACCGTCG CGGGCGCCTC GGTGCTTACT CCCGACTTCG CCAAGCTGGC GAAGAAGCTG
AAGCCCGCGG TGGTCAACAT CAGCACCTCA AAGACCCTAG CGGTGAAGAA GCGGCAGATC
GCCCCAGGGC AAGACCCTTT CCAGGAATAC TTCGACAAAT TTTTCGAGGG GCCGCACCAG
CGTCCGCAAA AGCAGAGGAA CCTGGGGACC GGCTTCATCA TCAGCGACGA CGGCTACATC
ATCACCAACA ACCACGTGGT GAAGGATGCC GACGAGATCA AGGTGAAGCT CTCCGACGGC
AGGGAGTTCG CGGGCGATGT CAAGGGGCGC GACGAAAAGC TGGACCTTGC CCTGGTGAAG
ATCGACGCCA AGGATCACCT CCCCGTGGCG CCTTTGGGGG ACAGCGACAA GATGGAAGTG
GGGGACTGGG TGATGGCTAT CGGCAACCCC TTCGGGCTCT CCCAGACCGT GACGGCAGGG
ATCATCAGCG CCCAGGGGCG CGTGATCGGT TCCGGCCCGT ATGACGACTT CATCCAGACC
GACGCCTCCA TCAACCCCGG CAACTCGGGG GGGCCGCTCT TCAACACCGA AGGGGAGGTG
ATCGGCATAA ATACGGCGAT CGTCGCCGGC GGCCAGGGGA TAGGATTCGC CATACCGGTC
AACATGGCGA AGGAGATCCT CCCGCAGCTG AAGTCTGCGG GCAAGGTGAC CCGCGGCTGG
CTCGGCGTTT CGGTGCAGCT GGTGACCCCG GATCTCGCCA AATCCTTCGG GCTCGACACC
GAGAAGGGGG CGCTGGTTGC CGACGTGGTG AAAGGCAGCC CCGCGGAGAA GGCGGGCCTC
AAGGGGGGCG ACATCATCCT CGAGTACGAC GGGCATCCCA TCAAGGAGAT GGGGGAGCTT
CCGCGCCGCG TAGCCGCCAC CCCGGTAGGA AAGAAGGTGA AAGTGGTGGT GCTGCGCGAG
GGGCGTCAAG AGCCGCTGCA GGTGACCGTC GAGCAGCTGA AGGAGGGCGG CGAGGAGGAT
AGTGCGGTCA CCAGCGACCG GCTCGGGGTG AAGGTGACGG AGCTTACCCC GGAGCGCGCG
CAGCAGTTGC GGCTGCAGGG GGACAAAGGG GTCGTGGTGA CCGATGTGGA GCCGGACAGC
CTTGCCGACC GGGCCGGCAT CCTGGAGGGG GACCTGATCA GGGAGATCAA CGGAGTGCGT
GTAAGCGGCG TGAGCGATTA CAGCAAGTTG ATCGCGGCGG CGAAGAAGGG TGGGTATCTG
AAGATGCTGC TTAGGCGGGG AGAAGCCTCC CTGTTCGTCG CGCTCAGGCT GGAATAG
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| Protein sequence | MQAAIVARFL VLSVFLSSIF STVAGASVLT PDFAKLAKKL KPAVVNISTS KTLAVKKRQI
APGQDPFQEY FDKFFEGPHQ RPQKQRNLGT GFIISDDGYI ITNNHVVKDA DEIKVKLSDG
REFAGDVKGR DEKLDLALVK IDAKDHLPVA PLGDSDKMEV GDWVMAIGNP FGLSQTVTAG
IISAQGRVIG SGPYDDFIQT DASINPGNSG GPLFNTEGEV IGINTAIVAG GQGIGFAIPV
NMAKEILPQL KSAGKVTRGW LGVSVQLVTP DLAKSFGLDT EKGALVADVV KGSPAEKAGL
KGGDIILEYD GHPIKEMGEL PRRVAATPVG KKVKVVVLRE GRQEPLQVTV EQLKEGGEED
SAVTSDRLGV KVTELTPERA QQLRLQGDKG VVVTDVEPDS LADRAGILEG DLIREINGVR
VSGVSDYSKL IAAAKKGGYL KMLLRRGEAS LFVALRLE
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