| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0218 |
|---|
| Symbol | |
|---|
| ID | 6783042 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 258607 |
|---|
| End bp | 259806 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642766185 |
|---|
| Product | amine oxidase |
|---|
| Protein accession | YP_002137045 |
|---|
| Protein GI | 197116618 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1232] Protoporphyrinogen oxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0000747133 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCAAT TCGACGCCAT CGTCATAGGT GCAGGAATCA GCGGACTCAG CTTTGCCAAC
TACTCTGCTG CCGCGGGACT GAACACGCTG GTCCTGGAGA AGAGCGGCCG GGTGGGCGGG
TGCTTCCATT CGCACCGCTT CGACGGTGAA GCGGCTGGCT TCTGGCTCGA ACTGGGGGCG
CACACCTGTT ACAACTCCTA CCAGGGGTTG ATCGGGCTTA TGGAGCGGCA CGGCATGATG
GAGAGCATCC TGGCCAGGGA GAAAGTCTCC TTCAAGATGC TTGTCGACAA CGAGATAAAG
AGCATAACCT CGCAACTCTC CTTCCCCGAG CTGTTCGGCT CCGCATGGCG GATCTTCACC
CTTAAAAAAG AGGGGGAGAG CGTCGCCTCC TACTACGGGC GCATCGTGGG GCGCAAGAAT
TACGACCGGG TCTTCGCACC GGCTTTCAAC GCGGTCATCT CGCAGCGCGC CAACGACTTT
CCCGCCGACA TGCTCTTCAA CAAGCGACCC AGGAGAAAAG ACGTCATCAA GAGCTTCACC
CTGCAGGGGG GGCTCAACAC CGTGATCGAC AAGCTCTCCG CCGCTGCCGG CATCACCGTT
GTAACCGGCG CCGAGGTGGC CCGGGTGGCG CAGGGGGGGA AAGGTTACGT CGTTGAACTC
GCCGGCGGCG AGGGTTTCGA GGCGCCGCGG CTGGTTTTGG CCACCCCGCC CCCCGCATCC
GCGCAACTTT CCGGCGAGAT CTCCCCCGAA CTCTCCCGCC TCTTCACGCA GATCAAGGTG
GAGAACATAG AGACGGTAGG TGCCGCGGTC AAGAAAGGGA AGCTGACGCT CCCCTCCATG
GCCGGCATCA TCCCCATCGG CGAGAACTTC TATTCCGCCG TTTCCCGGGA CACCGTGCCG
CACGACAGTT ACCGCGGCTT CAGTTTCCAC TTCAAGTCCG GGGGAGGGGC GCTGGAGGCT
AAGCTCAAAC GGGTGGCAGC AGTGCTGCGC GTGAAACCGG AAGACCTCGA ACAGGTAGTG
CAGCGGGAAA GCCAGCTCCC ATCGCCGGTG GTCGGGCACA AGGCGCTGAC CGACCGGATC
GACCAGATCA CCTCCGGCCA GAAGCTGTAC GTCACCGGCA ACTACTTTGC CGGCATGGCC
ATAGAGGACT GCATCGTGCG GTCGAGAAAA GAATATGAGA GGTTCACGGC AGCGCTTTAG
|
|---|
| Protein sequence | MKQFDAIVIG AGISGLSFAN YSAAAGLNTL VLEKSGRVGG CFHSHRFDGE AAGFWLELGA
HTCYNSYQGL IGLMERHGMM ESILAREKVS FKMLVDNEIK SITSQLSFPE LFGSAWRIFT
LKKEGESVAS YYGRIVGRKN YDRVFAPAFN AVISQRANDF PADMLFNKRP RRKDVIKSFT
LQGGLNTVID KLSAAAGITV VTGAEVARVA QGGKGYVVEL AGGEGFEAPR LVLATPPPAS
AQLSGEISPE LSRLFTQIKV ENIETVGAAV KKGKLTLPSM AGIIPIGENF YSAVSRDTVP
HDSYRGFSFH FKSGGGALEA KLKRVAAVLR VKPEDLEQVV QRESQLPSPV VGHKALTDRI
DQITSGQKLY VTGNYFAGMA IEDCIVRSRK EYERFTAAL
|
|---|
| |