| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0191 |
|---|
| Symbol | |
|---|
| ID | 6783013 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 225103 |
|---|
| End bp | 226815 |
|---|
| Gene Length | 1713 bp |
|---|
| Protein Length | 570 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642766157 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_002137018 |
|---|
| Protein GI | 197116591 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCATTTG ACGGTGATTT AGAGCACCTG CCCATAGTCG ACGTGATCCA GTTGCTGCAC
GCGACCGGCA AGTCCGGCAC CTTGACCTTG AAAAGCGCCA AGGGTGAGAG CCAGCTGGCC
TTTGTGGACG GGTTCGTGGT CAGCGCGAAT CACGTGAACA ACAGCGTCAG GATCGGCCAG
ATCATGCTCG ACATGGGGCT GATCACCAAA GAGAACCTCG ATCTGGCGCT TAAGGAGCAG
AGATCCGCCG GCTCGCAGCG CAAGCCGATC ATCCAGACCC TGATCGAGGG GGGGGTGGTC
AAGACTTCGG ATGCCTACAA GGGACTCGAA GCGCTGATCG AAATGACCAT CGTCGAGGTC
CTCACCTGGA CCAGGGGGAC CTTCTCCCTC GACGTCAACG AGTCCGTCGT TTCCGACGAC
TACCGCTACT TCCCCGAACA GGTCAAGCAG GAGATCCACC TCAACACGCA GAACCTGTTG
ATGGACGCCC TGCGCATCTA CGATGAGCGT AAGCGCGACG GCACCCTCAC CCCCGAGGCC
ATGTTCGGTA CCGCAGAGCC ACCGATGCCG GAAGCGCCTG CCGGCGCCGC TGAGATATCC
GCCGTCGACC TGGGGCTGGA GGAACTGGAC GAGCTGGAAA GGCGCATCCC CCAGCACTTC
GCCCCCCTGG CTGAGGAGCT CCCCGACACC CCGTCCAACA GGCTCCGGGA CGAGCTGACG
GGAATCCCCG TGGAGGAACA GCAGCTGCTT TTCCGCTACC TGGAGCAGCT GCCGCAGCCT
CAGGAGGGGG CCTTCGCCGG AACCGGGGTG GTGCTCTACA CCACCGACAA GGTGCTGCGC
GAATGCGTGG CCGCCGTCTG CGGCGCAAGC TTTCTCTGCG CGACCGACGA TCCTTCCCAT
ATCGATGCGG TCCTCGACCA GGCCCTCTCC AGGCAGCGCC TTCCCTTGCT GTTGGTGGAT
GCCGGCGAGC CGGGTGACGG AGCTGCTCTG CTCGCGTTTG CGCAGCAAAG ACGGGAACGT
CATCCCGATC TCCCCATCGT CCTTCTCGCC TCCCCCGGCG ACTACGCGCT CTTCGCACGC
GCATTCGACG TCGGAGCCAG CGCGTTTTTG CCCCGCGCCA CCAGAAAGGA GCGTGCCGGG
AGCTTCATCG CCGATGCTAT AGAGAGCTGT CGAGCCCTGG CCGGCTACCT GGAAAAGCGC
AGCGAGGAGC CCGGGCTCGC GCTGTTGCCC AGGTTCAGAA GCAGCTTTCT GGCCCTTTCC
GAGCAGCGCG ACCCGCCGGA GGTCACCTTT GCGCTGCTGC AGGCGGCCTG CGGCTTTTTC
AAGCGCGGGG TCACCCTGGT GGTGGTGCGC TCCGAGCTGA TCGCCGAACG CGCCATCGGA
GCGAGCGACA CGGGCGCCGT CACCTCGGTG AAGCTGCGCA TCCCGACCGG CGAGCCTGAC
CTGTATCAAA AGGCGCTGGA AGGAGAGATC TACTACGGCG ACGCCGACCG CGCCGTGCGC
GAGACCATGT TCTCCGCCAT CGGGGCTCCC GCCAGCAGCA GGATCCTCCT GCTTCCGGTC
AGGAGTTTCG GCAGGGTCAT CGCCGTCATC TACGCCGATT TCGGCTCCAG CGCCGGGGGC
GATCCTCAAC TGCAGCTGCT CGAGATCCTC TCCCAGCATG CGGGGCTCAT CATAGACAAC
GTGCTCTACC GCAAAAGGTG CGCGCAAAAA TAA
|
|---|
| Protein sequence | MSFDGDLEHL PIVDVIQLLH ATGKSGTLTL KSAKGESQLA FVDGFVVSAN HVNNSVRIGQ
IMLDMGLITK ENLDLALKEQ RSAGSQRKPI IQTLIEGGVV KTSDAYKGLE ALIEMTIVEV
LTWTRGTFSL DVNESVVSDD YRYFPEQVKQ EIHLNTQNLL MDALRIYDER KRDGTLTPEA
MFGTAEPPMP EAPAGAAEIS AVDLGLEELD ELERRIPQHF APLAEELPDT PSNRLRDELT
GIPVEEQQLL FRYLEQLPQP QEGAFAGTGV VLYTTDKVLR ECVAAVCGAS FLCATDDPSH
IDAVLDQALS RQRLPLLLVD AGEPGDGAAL LAFAQQRRER HPDLPIVLLA SPGDYALFAR
AFDVGASAFL PRATRKERAG SFIADAIESC RALAGYLEKR SEEPGLALLP RFRSSFLALS
EQRDPPEVTF ALLQAACGFF KRGVTLVVVR SELIAERAIG ASDTGAVTSV KLRIPTGEPD
LYQKALEGEI YYGDADRAVR ETMFSAIGAP ASSRILLLPV RSFGRVIAVI YADFGSSAGG
DPQLQLLEIL SQHAGLIIDN VLYRKRCAQK
|
|---|
| |