| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0124 |
|---|
| Symbol | |
|---|
| ID | 6782946 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 146381 |
|---|
| End bp | 148255 |
|---|
| Gene Length | 1875 bp |
|---|
| Protein Length | 624 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642766090 |
|---|
| Product | Polysulphide reductase NrfD |
|---|
| Protein accession | YP_002136951 |
|---|
| Protein GI | 197116524 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG5557] Polysulphide reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGCTGACT TAGGCTACGG CGAGATAAAC GACGACGTCC TGCGCGCGCT GAAGAAGCCG
ACGCTCCCCT ATTTCCTCAC CGCCGCCGCG CTCGCGGGGG TGGTCGGGCT CGCGGCGCTC
ACCTTCATGT ACCAGACCCA GGCGGGGATG GGGGTGACCG GGCTGAACCG CCCCGTCGGC
TGGGCCGTCT ACATCACCAA CTTCGTCTTC TGGGTCGGGA TCGCCCACTC CGGGACCCTG
ATCTCCGCCA TCCTCTACCT GATGCGCGCC GACTGGCGCG ACGCCGTCTC GCGCTCCGCC
GAGGCGATGA CCATCTTCGC GGTCCTGACC GCGGGGCTCT TCCCGCTCAT CCACCTGGGG
AGGCTTTGGG CCGCCTACTA CATCGTCCCC TACCCCTCGC AGCGCCAGAT CTGGCCCAAC
TTCGTGAGCC CCCTGGTCTG GGACGTCCTT GCCGTCACCA CCTACCTCAC GGTGAGCTCC
ATATTCTGGT TCGTCGGCAT GATCCCCGAC CTTGCCGCGG CGCGCGACCT GCACCAGGAA
CAGCTGGGCC CCAGGCACTG GCGCACCCGG CTCTACCGCG CGCTGTCGCT GGGCTGGTCC
GGCACCGGGA GCCAGTGGCA CCATTACGGG CGCTCCTACC TCTTCTTCGC CGCCTTTGCC
ACGCCGCTCG TGGTCTCGGT GCACTCGGTC GTTTCCTGGG ACTTCGCCAT GGGCCTCCTC
CCCGGGTGGC ACAGCGCCAT CTTCCCCCCC TACTTCGTCG CTGGCGCCAT CCACTCGGGG
CTCGCCATGG TGATCACCCT GCTGATCCCG ATGCGCAGAT ACCTGCGCCT GGAGCGCCTG
ATCGAAATGC GCCACTTCGA GATGCTGGCG AAGACCATCA TCCTCACCGC GACCATCGTC
GGCTACGCCT ACGCCGTCGA GGCCTTCATC GCCTGGTACG GCGAGGACCC CATCGAGTGG
CAGAACCACC TCTGGCGCGC CTTCGGCCCC CCGGCATGGA TGTACTGGCT CTGCGTCGTC
TGCAACGTCT TCGTCCCCTG GCTCTTCCTC TTCAAGAAGA TGCGCACAAG CCTCGTCCCC
CTCTTCGTCA TCTCGCTCCT CATCAACCTG GGGATGTGGT TCGAGAGGCT GATGATCATC
TACACCTCGC AGGCGCACGA CTTCCTGCCG CACAACTTCG GCGGCTATGC GCCCAGTTGG
GTCGAACTCA TGATCACCGC CAGCTCCTTC GGCTTCTTCT TACTCTTCTT CCTGGGCTTC
ACCAAGACGC TCCCCACGGT CCCTCTGAGC GAGCTGAAGG AGAAGGTGGC CGACGAGGAG
ATCAAGCCGG TGGGGAGCTG CGACAGCCGG GTGCGGGAGA GGATCGCCAC CCAAAGGCCG
AGCGTCTTGG CGCTCTTCTC CAATGCCGGG CGCCTGGTGG AGGCGGCGAA GCTTTCCTGC
GACGGAGGGT TCCAGGTGAT GGAGAGCTTC TCGCCGGTGA AGATCGAAGC GCTCGACCAC
GTGCTCAAAA AGCGCCATAG CCCGGTCCGC CTCTTCACCC TGGGGGGCGC CGTGAGCGGC
CTTGTCGGCG GCTTCTGGCT CGCCGGCGGT ACCGCGCTGG TGAACCGGCT CATAGTGGGT
GGTAAGCCGC CCCTCTCCTG GGTCCCCTTC TGCGTGGTCG CCTTCGAAGG GACCATCCTC
CTGGGATGCC TCGCCAATCT CCTGGGGCTC GCCCTTTTTT CCCGCCTGTT CCGGTTCGAG
ACCGCCCCCT ATTACGACCC CCGCTTCAGC CGCGACCGCT TCGGCCTTCT GGTGAGCTGC
AAGGCGGGCG AGGTGGACCG GCTGAAAGAG CTGCTGGCCC CGTCCCTCCC GGAGGAAATC
CATGTCCACA AGTGA
|
|---|
| Protein sequence | MADLGYGEIN DDVLRALKKP TLPYFLTAAA LAGVVGLAAL TFMYQTQAGM GVTGLNRPVG
WAVYITNFVF WVGIAHSGTL ISAILYLMRA DWRDAVSRSA EAMTIFAVLT AGLFPLIHLG
RLWAAYYIVP YPSQRQIWPN FVSPLVWDVL AVTTYLTVSS IFWFVGMIPD LAAARDLHQE
QLGPRHWRTR LYRALSLGWS GTGSQWHHYG RSYLFFAAFA TPLVVSVHSV VSWDFAMGLL
PGWHSAIFPP YFVAGAIHSG LAMVITLLIP MRRYLRLERL IEMRHFEMLA KTIILTATIV
GYAYAVEAFI AWYGEDPIEW QNHLWRAFGP PAWMYWLCVV CNVFVPWLFL FKKMRTSLVP
LFVISLLINL GMWFERLMII YTSQAHDFLP HNFGGYAPSW VELMITASSF GFFLLFFLGF
TKTLPTVPLS ELKEKVADEE IKPVGSCDSR VRERIATQRP SVLALFSNAG RLVEAAKLSC
DGGFQVMESF SPVKIEALDH VLKKRHSPVR LFTLGGAVSG LVGGFWLAGG TALVNRLIVG
GKPPLSWVPF CVVAFEGTIL LGCLANLLGL ALFSRLFRFE TAPYYDPRFS RDRFGLLVSC
KAGEVDRLKE LLAPSLPEEI HVHK
|
|---|
| |