Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_0098 |
Symbol | |
ID | 6782916 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 122824 |
End bp | 123849 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642766060 |
Product | dihydrouridine synthase DuS |
Protein accession | YP_002136925 |
Protein GI | 197116498 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0042] tRNA-dihydrouridine synthase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00993648 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCATGG AAAACCCGCG CCACCAAGCC CTCCAGCCGA ATTCCGCAAC ACCTGCGCCA GCACCCTCGA AGCTCCCCTG GCTTCCCGGG GTGAAGCCGC TCATGCTGGC CCCCATGCAG GGGTTGACCA ACCGTGCGCT CCGCTCGCTT TTCACCAAGT GGGTGCGTCC GGACGTGGTC TGGACCGAGT TCATGCGGGT GAACCCGGTG TCGGCCAAGA AGCGCCTCAT GCCGGGCGAC CTGCGCGAGA TCAGTGCCAG CGAGGACGGG ATTCCCCTAG TGGTGCAGTT GATCGGGCAC GGGCGGGAGG CGCTCGTTTC CGCGGCGCAA GCCGCGCAGG ACGCGGGGGC GGTGCACCTG AACCTGAACA TGGGATGCCC CTACGGCCGC ATGACCAGCG GGCTTACCGG CGGCGGTATG CTGAAAAAGC CGGAACTTCT GGAAGAGATC ATCCCTGCGC TGCGCGAGGC GATCCACGGC TCCTTCTCCA TCAAGCTCCG CGCGGGGTAC GAAGACCCGC AGCAGGTGTT CTCGCTTCTC CCTCTCTTCG AGCGGTCCGG TGTGGACTTC CTGGTGCTCC ATCCGCGCAC CGTGCGCCAG GCCTACAACG GCTGGGCCGA TCACGAGGTG ACGGCGGAGG TGGTGCGCCA AACCTCCATC CCGGTCATCG CCAACGGAGA CATCAGGAGC GCGGCGGGTG GGCAGCGCCT TTTGGAGCAG ACCGGCGCCG CCGGCCTCAT GCTCGGCAGG GGGGGCATCG GCGAGCCCAT GCTCTTCGAG CGTTTGCGCG GGCGCGCTGC AGCCGAACCG GACCTCGCCG AAAGAAAAGC CATGCTCCAC CGCTACCTAA TCGACCTGCT TCCCCTTTAC TGCGCCCTTT TCTGCGGCGA CGCCCAGGTC CTGGGGAAGA TCAAAGGCGT GGTCTCCAAT GTCGAAGACG CAGAACTTGA GCGCGAACTG AAAAAGCTTA CAAGATCCAA GACCCTGCAG GCCTTCCGGT CGGCGCTAGA AGAACTCGCC CCTTAG
|
Protein sequence | MTMENPRHQA LQPNSATPAP APSKLPWLPG VKPLMLAPMQ GLTNRALRSL FTKWVRPDVV WTEFMRVNPV SAKKRLMPGD LREISASEDG IPLVVQLIGH GREALVSAAQ AAQDAGAVHL NLNMGCPYGR MTSGLTGGGM LKKPELLEEI IPALREAIHG SFSIKLRAGY EDPQQVFSLL PLFERSGVDF LVLHPRTVRQ AYNGWADHEV TAEVVRQTSI PVIANGDIRS AAGGQRLLEQ TGAAGLMLGR GGIGEPMLFE RLRGRAAAEP DLAERKAMLH RYLIDLLPLY CALFCGDAQV LGKIKGVVSN VEDAELEREL KKLTRSKTLQ AFRSALEELA P
|
| |