Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_0043 |
Symbol | |
ID | 6782861 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 52879 |
End bp | 54498 |
Gene Length | 1620 bp |
Protein Length | 539 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642766005 |
Product | cytochrome c oxidase, subunit I |
Protein accession | YP_002136870 |
Protein GI | 197116443 |
COG category | [C] Energy production and conversion |
COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCAAG ATACGGCAAT GGCGCAGGGC GGTTTCTGGC GGGATACCAG GAGGAGCGGG ATAGGCTCCT GGATCTTCTC AACCGACCAC AAGCGGATAG GGATGATGTA CCTCTACTGC GTACTGAGCT TCTTCCTGGT CGGGGTCGTC CTCGGGTTCC TGATCCGGCT GGAGCTGATC GCGCCCGGCC CGACCATCGT CACCGCCCAG ACCTACAACG CCCTCTTTAC GGTGCACGGG GTGGTGATGA TCTTTCTCTT CATCATCCCG GGGATACCGG CCTCCTTCGG CAACCTGGTG CTCCCCATCC AGTTGGGCGC CCGCGACGTC GCCTTTCCCA GGGTGAATCT TTTATCCTGG TGGCTCTACG CCATCGGCGC CGTCATCGTG CTGGTTTCCC TCTTCACAGG CGGAGGCGCG CCCGACACCG GGTGGACCTT CTACGTCCCC TTCAGCGCCA GGACCAGCAC CAACGTCTCC CTGGCTGTCT TCGGCGTATT CGTCCTCGGC TTTTCCTCCA TCCTCACCGG GATCAACTTC ATCACCACCA TCCACCGCAT GCGCGCACCG GGGATGACCT GGACCCGGAT CCCGCTATTC ACCTGGAGCC TATACGCGAC AGCCTGGGTG CAGGTGCTCG CCACCCCGAT CATCGCCATC ACGCTCCTAT TGGTGGTGAC CGAGCGGATC CTGGGCCTCG GGCTTTTCGA CCCCAACCGC GGCGGGGACC CGGTAATGTA CCAGCACATG TTCTGGATCT ACTCGCACCC CGCCGTGTAC ATCATGATCC TGCCGGGCAT GGGGGTGATC TCGGACATCA TCCCGGTCTT CTCCAGAAAG CCCATCTTCG GCTACAAGAT GATCGCCTTT TCCAGCCTCG CCATCGCCGC GGCCGGCTCC GCCGTCTGGG GGCACCACAT GTACACCTCG GGGATGAGCG ACCTGGGCGT ACTAGTCTTC TCGTTCCTGA CCTTCATCGT GGCGATCCCC TCGGCCATCA AGGTGTTCAA CTGGGTCTCC ACCATGTACA AGGGCTCCAT CTCGCTTGAG GCCCCCATGC TCTTCGCGCT CTCCTTCATC CTGCTTTTCT CCATCGGCGG CTTGTCCGGG CTGATCCTCG GCGCCGCCGC CACCGACATC CACGTGCACG ACACCCATTT CGTGGTCGGG CATTTCCGCT ACGTCATGTT CGGCGGCACC GGTTTCGCCT TCTTCGCGGC GGCGCATTAC TGGCTCCCCA AATACTACGG GCGCAGATAT AAGGAAAAGC CCGCCATCGT CGGCTGGATC CTCATGTTCG TAGGCTTCAA CGTCATGTAC TTCACCATGC AGGTGCTGGG GATGGAGGGG ATGCCCAGGC GTTATTACGA CTACCTCCCG GAATTCACCC GGCTGAACGT CGTCGCCACC GTCGGGAGCT GGATCCTGGT GGCCGGAATC GTCATAGTGG TCTGGAACCT CTGGCGCGGC CTGTTCAGGG GCGAGCCGTT CACCGGCAAC CCCTGGGGAG GCGCGACGCT TGAGTGGAGC ATCGCGACGC CTCCTCCCAC CGAAAATTTT GATGAGGACC CGGTGGTGAC CCACGGGCCG TACGAGTTCA AGGGGGCAGG CATTCCATGA
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Protein sequence | MSQDTAMAQG GFWRDTRRSG IGSWIFSTDH KRIGMMYLYC VLSFFLVGVV LGFLIRLELI APGPTIVTAQ TYNALFTVHG VVMIFLFIIP GIPASFGNLV LPIQLGARDV AFPRVNLLSW WLYAIGAVIV LVSLFTGGGA PDTGWTFYVP FSARTSTNVS LAVFGVFVLG FSSILTGINF ITTIHRMRAP GMTWTRIPLF TWSLYATAWV QVLATPIIAI TLLLVVTERI LGLGLFDPNR GGDPVMYQHM FWIYSHPAVY IMILPGMGVI SDIIPVFSRK PIFGYKMIAF SSLAIAAAGS AVWGHHMYTS GMSDLGVLVF SFLTFIVAIP SAIKVFNWVS TMYKGSISLE APMLFALSFI LLFSIGGLSG LILGAAATDI HVHDTHFVVG HFRYVMFGGT GFAFFAAAHY WLPKYYGRRY KEKPAIVGWI LMFVGFNVMY FTMQVLGMEG MPRRYYDYLP EFTRLNVVAT VGSWILVAGI VIVVWNLWRG LFRGEPFTGN PWGGATLEWS IATPPPTENF DEDPVVTHGP YEFKGAGIP
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