| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0043 |
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| Symbol | |
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| ID | 6782861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 52879 |
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| End bp | 54498 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642766005 |
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| Product | cytochrome c oxidase, subunit I |
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| Protein accession | YP_002136870 |
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| Protein GI | 197116443 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCAAG ATACGGCAAT GGCGCAGGGC GGTTTCTGGC GGGATACCAG GAGGAGCGGG
ATAGGCTCCT GGATCTTCTC AACCGACCAC AAGCGGATAG GGATGATGTA CCTCTACTGC
GTACTGAGCT TCTTCCTGGT CGGGGTCGTC CTCGGGTTCC TGATCCGGCT GGAGCTGATC
GCGCCCGGCC CGACCATCGT CACCGCCCAG ACCTACAACG CCCTCTTTAC GGTGCACGGG
GTGGTGATGA TCTTTCTCTT CATCATCCCG GGGATACCGG CCTCCTTCGG CAACCTGGTG
CTCCCCATCC AGTTGGGCGC CCGCGACGTC GCCTTTCCCA GGGTGAATCT TTTATCCTGG
TGGCTCTACG CCATCGGCGC CGTCATCGTG CTGGTTTCCC TCTTCACAGG CGGAGGCGCG
CCCGACACCG GGTGGACCTT CTACGTCCCC TTCAGCGCCA GGACCAGCAC CAACGTCTCC
CTGGCTGTCT TCGGCGTATT CGTCCTCGGC TTTTCCTCCA TCCTCACCGG GATCAACTTC
ATCACCACCA TCCACCGCAT GCGCGCACCG GGGATGACCT GGACCCGGAT CCCGCTATTC
ACCTGGAGCC TATACGCGAC AGCCTGGGTG CAGGTGCTCG CCACCCCGAT CATCGCCATC
ACGCTCCTAT TGGTGGTGAC CGAGCGGATC CTGGGCCTCG GGCTTTTCGA CCCCAACCGC
GGCGGGGACC CGGTAATGTA CCAGCACATG TTCTGGATCT ACTCGCACCC CGCCGTGTAC
ATCATGATCC TGCCGGGCAT GGGGGTGATC TCGGACATCA TCCCGGTCTT CTCCAGAAAG
CCCATCTTCG GCTACAAGAT GATCGCCTTT TCCAGCCTCG CCATCGCCGC GGCCGGCTCC
GCCGTCTGGG GGCACCACAT GTACACCTCG GGGATGAGCG ACCTGGGCGT ACTAGTCTTC
TCGTTCCTGA CCTTCATCGT GGCGATCCCC TCGGCCATCA AGGTGTTCAA CTGGGTCTCC
ACCATGTACA AGGGCTCCAT CTCGCTTGAG GCCCCCATGC TCTTCGCGCT CTCCTTCATC
CTGCTTTTCT CCATCGGCGG CTTGTCCGGG CTGATCCTCG GCGCCGCCGC CACCGACATC
CACGTGCACG ACACCCATTT CGTGGTCGGG CATTTCCGCT ACGTCATGTT CGGCGGCACC
GGTTTCGCCT TCTTCGCGGC GGCGCATTAC TGGCTCCCCA AATACTACGG GCGCAGATAT
AAGGAAAAGC CCGCCATCGT CGGCTGGATC CTCATGTTCG TAGGCTTCAA CGTCATGTAC
TTCACCATGC AGGTGCTGGG GATGGAGGGG ATGCCCAGGC GTTATTACGA CTACCTCCCG
GAATTCACCC GGCTGAACGT CGTCGCCACC GTCGGGAGCT GGATCCTGGT GGCCGGAATC
GTCATAGTGG TCTGGAACCT CTGGCGCGGC CTGTTCAGGG GCGAGCCGTT CACCGGCAAC
CCCTGGGGAG GCGCGACGCT TGAGTGGAGC ATCGCGACGC CTCCTCCCAC CGAAAATTTT
GATGAGGACC CGGTGGTGAC CCACGGGCCG TACGAGTTCA AGGGGGCAGG CATTCCATGA
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| Protein sequence | MSQDTAMAQG GFWRDTRRSG IGSWIFSTDH KRIGMMYLYC VLSFFLVGVV LGFLIRLELI
APGPTIVTAQ TYNALFTVHG VVMIFLFIIP GIPASFGNLV LPIQLGARDV AFPRVNLLSW
WLYAIGAVIV LVSLFTGGGA PDTGWTFYVP FSARTSTNVS LAVFGVFVLG FSSILTGINF
ITTIHRMRAP GMTWTRIPLF TWSLYATAWV QVLATPIIAI TLLLVVTERI LGLGLFDPNR
GGDPVMYQHM FWIYSHPAVY IMILPGMGVI SDIIPVFSRK PIFGYKMIAF SSLAIAAAGS
AVWGHHMYTS GMSDLGVLVF SFLTFIVAIP SAIKVFNWVS TMYKGSISLE APMLFALSFI
LLFSIGGLSG LILGAAATDI HVHDTHFVVG HFRYVMFGGT GFAFFAAAHY WLPKYYGRRY
KEKPAIVGWI LMFVGFNVMY FTMQVLGMEG MPRRYYDYLP EFTRLNVVAT VGSWILVAGI
VIVVWNLWRG LFRGEPFTGN PWGGATLEWS IATPPPTENF DEDPVVTHGP YEFKGAGIP
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