| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0002 |
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| Symbol | |
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| ID | 6782821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 1757 |
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| End bp | 2875 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642765966 |
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| Product | DNA polymerase III, beta subunit |
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| Protein accession | YP_002136831 |
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| Protein GI | 197116404 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0618208 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGTTCA GAATCAGCAA AGAGATTTTT ATGAAAGCCC TCCAGAGAAT CCAGGGTATC
GTAGAAAAAC GCAATACCAT GCCGATTCTC TCCAACGCGC TGCTGGAGGT TCAAAACGAC
CAGCTCTTCA TCACGGCCAC CGATCTCGAG GTAGGCATGA AGAGCTCCTA CCCCACTGCC
GTCATCAGGG AAGGAAAGAT CACCGTATCG GCCAAAAAGC TTTACGAGAT CGTCAAGGAG
ATGCCGGACG AGGAGATTCA CTTCACCACC AAGGACAACG ACTGGGTAGA GATCACCTGC
GGCAAGGCGC GATTCAACAT AGTCGGGCTT TCATCCGAAG AGTTCCCTTA TTTCCCCAAG
GTGAAGGAAG AGAGCTTCCT GGTCTTCAAG AACGAGATTC TCGCAGACAT GATCGAGAAG
ACCTCCTATG CCATCTGCTA TGACGAGACC AAGTACAACC TGAACGGCGT CTTCATCAAA
GCGTTCGACG AAAACGGAGA GAACGTGCTC AAGATGGTGG CGACAGACGG TCACCGACTA
TCCGTCTCTC AGAAAGCGAT CACCGGCAAC ATCACTTCCG AGCTCTCCAA AGGGGTCATC
TTCCCCAAGA AGGGTATCTT CGAGCTGAAA AAGATGGTGG AGGAGGAAGA CGGGGAGATC
ATGCTCGGCT TCATGGACAA CTCCGCGGTC ATCAAGAAAG GGAACACGGT GGTGGTCATG
CGGCTCATCG ACGGCGAGTT CCCGGACTAC ACCAAGGTGA TTCCAGCCAG CAACGACCGG
ATCGTGCAGA TAAACCGCGA CAAGTTCCTG CACTCGCTGA AAAGGATGGC GATCCTCTCC
AGCGAGAAGT TCAAGGGGGT CAAGATAGAG GTGAACCCCG AGCTGGTGAT TATCTCGTCC
AGCAACCCGG AACTCGGCGA GGCGCGCGAA GAGATCGAGG TCCAATACGA AGGCAACAAC
ATCTCGGCCC GCTTCAACGC GAAGTACCTG ATCGACGTCC TGTCGGTAAT GGAGCAGCGC
GAAGTGGAGC TGAAGCTCAA GGACGAACTC TCCCCGGTCA TCATGAAGGC AGCGGCAGAG
GAGGAGTTCC TGGCAGTCAT CATGCCGATG AGGCTTTAA
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| Protein sequence | MEFRISKEIF MKALQRIQGI VEKRNTMPIL SNALLEVQND QLFITATDLE VGMKSSYPTA
VIREGKITVS AKKLYEIVKE MPDEEIHFTT KDNDWVEITC GKARFNIVGL SSEEFPYFPK
VKEESFLVFK NEILADMIEK TSYAICYDET KYNLNGVFIK AFDENGENVL KMVATDGHRL
SVSQKAITGN ITSELSKGVI FPKKGIFELK KMVEEEDGEI MLGFMDNSAV IKKGNTVVVM
RLIDGEFPDY TKVIPASNDR IVQINRDKFL HSLKRMAILS SEKFKGVKIE VNPELVIISS
SNPELGEARE EIEVQYEGNN ISARFNAKYL IDVLSVMEQR EVELKLKDEL SPVIMKAAAE
EEFLAVIMPM RL
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