| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AnaeK_4254 |
|---|
| Symbol | |
|---|
| ID | 6784269 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. K |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011145 |
|---|
| Strand | + |
|---|
| Start bp | 4793133 |
|---|
| End bp | 4794404 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 79% |
|---|
| IMG OID | 642765721 |
|---|
| Product | homospermidine synthase-like protein |
|---|
| Protein accession | YP_002136586 |
|---|
| Protein GI | 197124635 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG5310] Homospermidine synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAACCGTC CCCTCGGTCC CCGCGGCACC GCGCTGCTCG TCGGCGCCGC CGGCGGCGTC
GCCCGCGCCC TGCTCTCGGT GCTCGCGTCT ACGCCGCTGG GGCGCGCGCT CGCCGCGCGC
CTCGACGCGC TGCTGCTCGT GGACGCCCGG CCGCTCCCGC CCGGCCCGCT GCCGCCGGTC
GCGCGGCCGC TCCCGCCCGC GGCGATCCGG CACGCCGACG ACCTGGCGCG CCTGGTGCGC
GACCACGGCG TGGACCAGGT GGTGGACCTG TCCTCGCTCG ACACGCTCGA CGCGATCCGC
GCCTGCGACG CGGCGGGCGC GAGCTACCTC GACACCAGCC TCGAGCACTG GCCCGGGCAG
GCGCCCCGCG CCTGGGAGTC GCTCGTGCTT CGCGCGCTGC CGCCGGCGCG CCCGGCGCTC
CGGCGCGGGA GCTTCCTGGT GGGCAGCGGC ATGAACCCGG GGGTGGTGAA CGCGCTCGTG
TTCGCGGGGA TCGAGGCGTT CGCGCGCCGG GCCGGCGTCG CGCCCACGCC CGAGGCGCTG
CGGCTGCACG CGGTGCTGTT CACCGAGGAG GACACCACGG TCGAGACGAT GGGCGGGCCG
CCTGCGGGGG CGTTCCCCAT GACCTGGAGC CCGCTGCACT GCCTGGAGGA GCTGCTCCTC
GACGACGCGA TCGCCGTGCG GCGCGGGGAG CTCGTCCGCC TCGGCCACCG GCCCTGCGAC
GCGTGGTACC GCGCCCGCTG CGGGGACCGG GTGGTGGAGG GGTTCGTGGT CCCGCACGAG
GAGGTGCTCA CGCTGGCGGA GCGCCTGCCG GGGCAGGAGC TGGCGTTCGT GTACCGGCTC
CCGCCCGCCG CCCGCGCGGC GCTCGCGGCG GCGCCGCACC GGGTTCGCCC TGCCGCCTGG
CCGCTCCACC GCATGTACCC GCCGCACCGC ACCGCGCTCC GGGGCCGCGA TCGCGTGGGC
GTGCTCCTGT GCAGCCTCCG GTTCGGAGAG CTCTGGCTCG GCTACGACGT GGACGCGGTC
GCCGCCGGGC GCCTCGCCAC CAGCGCGACC CAGCTCCCGG TGGCCGCCGG CGTGGCGGCG
GGCTGGGCGC AGCTCGGCCG CCGCCGCGGG CTCCACTTCG TGGAGGACCT CGACTGGCGC
GAGCACCTGG CGCGGGTGGA CGCGCTGCTG GGCCGGGCCC TCGTGGTCCA CGACCCGCAC
GCGCCGCCGC GCACGCTCGA GGAGCGGCGC GCGGCCGCGG CACCGGCGGA GGTGGCGGCG
CTCCCCGCCT GA
|
|---|
| Protein sequence | MNRPLGPRGT ALLVGAAGGV ARALLSVLAS TPLGRALAAR LDALLLVDAR PLPPGPLPPV
ARPLPPAAIR HADDLARLVR DHGVDQVVDL SSLDTLDAIR ACDAAGASYL DTSLEHWPGQ
APRAWESLVL RALPPARPAL RRGSFLVGSG MNPGVVNALV FAGIEAFARR AGVAPTPEAL
RLHAVLFTEE DTTVETMGGP PAGAFPMTWS PLHCLEELLL DDAIAVRRGE LVRLGHRPCD
AWYRARCGDR VVEGFVVPHE EVLTLAERLP GQELAFVYRL PPAARAALAA APHRVRPAAW
PLHRMYPPHR TALRGRDRVG VLLCSLRFGE LWLGYDVDAV AAGRLATSAT QLPVAAGVAA
GWAQLGRRRG LHFVEDLDWR EHLARVDALL GRALVVHDPH APPRTLEERR AAAAPAEVAA
LPA
|
|---|
| |