Gene AnaeK_3792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnaeK_3792 
Symbol 
ID6785259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. K 
KingdomBacteria 
Replicon accessionNC_011145 
Strand
Start bp4271236 
End bp4271928 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content75% 
IMG OID642765264 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002136132 
Protein GI197124181 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0756437 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGCCG CGCTAGTGTT CGCTCGAAGC GTCGTTCGAT GGTCGAAGGG GGATCCCATC 
GCTCGCCTGG CCCAGAGACT CGCGCTCGCC GCACCCGTGA CGCCGCAGGC CGAGGCGGAC
GTCCTCGACC TCGCCGAGCT CGCGGATCGC GACGCGGTCG AGCGCACCCT CGCCGGCGAC
ACCGACGCGT TCGCGGGCGT GGTCCGGCGC CACGCCGGCG GCCTGGTCGG CATGTGCAGC
CGCATGGTGA GCGACCCGCG CCTGGGCGAG GAGCTCGCGC AGGAGGCGTT CGCCCGCGCC
TACACGCGGC TCGCCTCGTT CCGCGGCGAC TGCCGCTTCC GCCACTGGCT CTACCGCATC
GCCGTGAACG GCTGCCGCGA CTGGCTGAAG GCGGGGGCGC GGGCGGAGCG CGCCAGCGAC
CTCTCCGGCG ACGAGCTGGT CAGCGCGGTG GACCCGGAGC GCGACGCCGC CGCCCGGCAG
GCGCTGCTCG CGCTGCAGGG CGCGCTCGCC GCGCTCCCGG CCAAGTACCG CGAGGCGTTC
ACGCTGTTCC ACGTCGAGAA CCTTCCCTAC GAGGAGATCG AGGCGGCCAC CGGCGTGCGC
GTCAACGCGC TGAAGGTGCG CGTGCACCGC GCGCGCCTGA TGCTGCGCGA GCGCCTCGGC
GACCTGCTCG ATCCCGACGA GGTGACGCCG TGA
 
Protein sequence
MAAALVFARS VVRWSKGDPI ARLAQRLALA APVTPQAEAD VLDLAELADR DAVERTLAGD 
TDAFAGVVRR HAGGLVGMCS RMVSDPRLGE ELAQEAFARA YTRLASFRGD CRFRHWLYRI
AVNGCRDWLK AGARAERASD LSGDELVSAV DPERDAAARQ ALLALQGALA ALPAKYREAF
TLFHVENLPY EEIEAATGVR VNALKVRVHR ARLMLRERLG DLLDPDEVTP