| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AnaeK_3255 |
|---|
| Symbol | |
|---|
| ID | 6787238 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. K |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011145 |
|---|
| Strand | - |
|---|
| Start bp | 3664090 |
|---|
| End bp | 3665322 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 83% |
|---|
| IMG OID | 642764725 |
|---|
| Product | efflux transporter, RND family, MFP subunit |
|---|
| Protein accession | YP_002135604 |
|---|
| Protein GI | 197123653 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1566] Multidrug resistance efflux pump |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.524735 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGCAA AACGCCGTGC GCTCCTGGCC GGGTTCGCCG CGCGACGCGG GCGGGTCCTC
GCGCTCGCCG CCGCGGGGGT GGCCGCCGCG TGCGGCGCCG CGCTGGCCGC TCGCCCGCCT
GCGCTGGCGA CGGCGCGCGT CCGGCGGGTG GCGCTGCGCG AGACGGTGGT CGCGAGCGGG
CGGGTGCTGG CCGCCGGGCG GGCGGAGCTG GGCCTCCCGC TGGCAGGGGT GGTCCGGGCG
GTCCACGTCG ATCGCGGCGC CCGGGTGCGC GCGGGCGAGG TGCTCCTCGA GCTCGACGAC
GCCGCGCTCG CCGCCACGCT CGAGGAGCGC CGCGCCGCGC TCGGCGCTGC GGAGGCGCGG
CTGGCGCAGC TCGCCACGAC GTCGGCGGCG TCGGCGAGCG CCGGGCTGAG CGAGGCGGAC
GCGGCGCTCC GGCGGGCAGA GGCCGAGCTG CGGCGCGCCG CGACGCTCCG CGCGGAGGAG
GCGATCGCGC CGGCCGCGCT GGAGGAGGCG GAGCTCGCGG CGGATCGCGC CCGGAGCCGC
CGCGCCACCG CGCTGGCGGC CCGCGAGGAC GTGCAGGGGG CCGAGCTCCG GCTGGCGCGC
GCGCGGGCCG CCGAGGCGGC TGCGGCGGTC CGCACCGCCG AGGCCCGGCT CCGCGAGGCC
CGGGTGCGGG CGCCGGCGGA CGGGCTCGTG CTCGAGCGGC GGGCCGAGCC GGGCGACGTG
GTGACCGCCG GGCGCGCGCT GCTGGTGCTC GCGACGGACG GCGAGGCGCG CGTGGCGGTG
GAGCTGGACG AGCGTCACCT GGCGCGCGTC CGGCCCGGGC AGCTCGCCCG CGTCGCCGCC
GACGCCTGGC CGGAGGTGGT GTTCGGCGCC GTGGTCGCGT CGGTGGGACC GGGCGTGGAC
CCGGCCCGGG GGACGAGCGA GGTCCGGCTC CGGGTCCCGG ACCCGCCGCG CGCGCTGGTG
CCGGACCAGA CCGTCTCGGT GGAGGTCGAG ACCGGCGCGA GGCCGGACGC GCTCGCCATC
CCGCCGGAGG GCCTGCGCGA GGCGCCGGAC GGCTCGACCT GGTGCGCCGT GGTCCGGGAC
GGGCGCCTGG CGCGCGCGGC GGTGCGCGCC GGGCTGCGCG CGGCGCACGC CGTCGAGGTG
ACGAACGGGC TCGCCGAGGG CGAGGCGGTG GCGACGGGGG CTGCCGCGGA GGCGCTGCTC
GGCCGCCGGG TGCGGCCGCG CGAGGAGCGC TGA
|
|---|
| Protein sequence | MSAKRRALLA GFAARRGRVL ALAAAGVAAA CGAALAARPP ALATARVRRV ALRETVVASG
RVLAAGRAEL GLPLAGVVRA VHVDRGARVR AGEVLLELDD AALAATLEER RAALGAAEAR
LAQLATTSAA SASAGLSEAD AALRRAEAEL RRAATLRAEE AIAPAALEEA ELAADRARSR
RATALAARED VQGAELRLAR ARAAEAAAAV RTAEARLREA RVRAPADGLV LERRAEPGDV
VTAGRALLVL ATDGEARVAV ELDERHLARV RPGQLARVAA DAWPEVVFGA VVASVGPGVD
PARGTSEVRL RVPDPPRALV PDQTVSVEVE TGARPDALAI PPEGLREAPD GSTWCAVVRD
GRLARAAVRA GLRAAHAVEV TNGLAEGEAV ATGAAAEALL GRRVRPREER
|
|---|
| |