Gene MADE_04075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_04075 
Symbol 
ID6776534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp4386941 
End bp4387942 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content45% 
IMG OID642757526 
Productgalactose operon repressor 
Protein accessionYP_002128359 
Protein GI196158870 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTACCA TTTACCAAGT TGCTGAACGC GCGGGCGTTT CATTATCTAC CGTATCCCGT 
GTTTTAAATG GTAAAACGTC AGTAAATAAA GTGCTGAAAG AACGGGTGGA GAAAGCGGTA
AAGGAACTGA ATTACCGACC AAACTCAGTT GCTCGCTCAT TGGCGAACAG TAGAACCGAC
AGCATAGGTG TACTTGTCCC CGAGCTTAAT GCACCTTTTT TCGGTGACTT AATGCAAGCG
GTTGAATCTA CATTACGCGC TCAAGATAAA CACGTCATTA TCACGGTAGG GCGCAATTGT
TTAGAAACGG AAAAGGATGC CGTAGAATTT CTGATAAGCC GAAATTGCGA TGCGCTTATC
ATGCACGCAG AAGCGCTATC TGATGCGTAC CTCTTAGAAC TAAATCAATC CAAGCTTCCC
GTTGCGCTAG TCAATCGCAA GGTAGATGGC CTCCCCGATG CCTGTACAAC CTTAGATAAC
GAAAAAGGTG GCTACCTAGC AACACGACAT TTATTAGAGT TAGGCCATAA GCACATTGCT
TACATCTCTG GCCCTACTGA CAAAGCAGAT GCCTGTTTAC GCTTAAAAGG GCATAAGCGT
GCGCTAAGTG AGGCAGGGTT AACCGTTACC CCCCAGCTGA TATTTAATGG CGATTATTCA
GAGGATGACG GTAAGGTAGG GTTGCTTGAG TTGATGGCAC AAGATCAACA CTTTTCCGCT
TTAGTGTGCG CGAACGACTG GATGGCGTCA GGTGCTATTA GTTGTGCAAG AGACTTAGGA
ATGAGCTTGC CACATGACTT ATCCATTGTG GGTTTTGATG ATGTCGTTTT TGCCCATCAT
GTTTTTCCTA GGTTAACCAC AGTAAGTAAC CCTGTGGCTG AAATGGCCGA AATGTCAGCA
AAGTACATAT TAAATAAGGT CTATGGCCAA GGCCATGAGA TTAAGCAATG CTTCGAACCT
ACGTTGGTTG TAAGAGAGTC TGCGATTAAA TGCGAAGGTT GA
 
Protein sequence
MPTIYQVAER AGVSLSTVSR VLNGKTSVNK VLKERVEKAV KELNYRPNSV ARSLANSRTD 
SIGVLVPELN APFFGDLMQA VESTLRAQDK HVIITVGRNC LETEKDAVEF LISRNCDALI
MHAEALSDAY LLELNQSKLP VALVNRKVDG LPDACTTLDN EKGGYLATRH LLELGHKHIA
YISGPTDKAD ACLRLKGHKR ALSEAGLTVT PQLIFNGDYS EDDGKVGLLE LMAQDQHFSA
LVCANDWMAS GAISCARDLG MSLPHDLSIV GFDDVVFAHH VFPRLTTVSN PVAEMAEMSA
KYILNKVYGQ GHEIKQCFEP TLVVRESAIK CEG