Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03965 |
Symbol | |
ID | 6776197 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 4273112 |
End bp | 4273591 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642757416 |
Product | general secretion pathway protein M |
Protein accession | YP_002128249 |
Protein GI | 196158760 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3149] Type II secretory pathway, component PulM |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGCAC TATTAGAAAA ATACAAAGCC CTCACTGAAC GTGAGCAAAA ACTGGTGCTT ATTTCCGCTG TTATGATTGC GATTGCGCTG TTCTATTTTG CTGTTTGGTC GCCACTTAAT ACTGCTTTAG ACAAACAGAA GCAGCTGCTT GATAACCAGC AGTCGCTTTT AGTTTGGGTA AAAGACAGCG GTGCACGCGC ACAGCAATTA CGCCGCAGTA CGGGCAGTAA ACGCGCCTTT TCTGGCTCTT TACCCCAAGC GGTAAACCGC ACTACCGCTC AGCACGACAT TGCTATTTCA CGCATGCAGC CTCAGGGTGA TGAGCTTCAA GTGTGGGTAG ATCAAGCGCC TTTTAACGCG GTTTTAGACT GGCTAAAAGC CATGGAAAAC ATGGGCGTAG TTATTCTTCA AGCCGATATT GCCGAAGCAG ATGCCCCAGG CTATATCAAA ATTCGCCGAC TACAGTTAGG TAAAGCATGA
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Protein sequence | MNALLEKYKA LTEREQKLVL ISAVMIAIAL FYFAVWSPLN TALDKQKQLL DNQQSLLVWV KDSGARAQQL RRSTGSKRAF SGSLPQAVNR TTAQHDIAIS RMQPQGDELQ VWVDQAPFNA VLDWLKAMEN MGVVILQADI AEADAPGYIK IRRLQLGKA
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