| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03899 |
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| Symbol | |
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| ID | 6777339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 4200363 |
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| End bp | 4203239 |
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| Gene Length | 2877 bp |
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| Protein Length | 958 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642757350 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_002128183 |
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| Protein GI | 196158694 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGCAG TTTTAGCGTC TGCTATTTCT GCTAATAGTG CATTTGCCCA AAACGCGCAA
CCCAATAACG ACGTAGAAGT GATTGAGGTA AGTGGTATCC GTTCATCGGT TGCAAAATCA
ATGGATGTTA AACGCAGCTC TGCCGGCGTA GTTGATGCCA TAAGTGCCGA AGATATCGGT
GACTTCCCTG ATACCAACTT AGCTGAATCA CTACAGCGTA TTACCGGCGT CTCTATCGAC
CGTTCAGGCG GTGAAGGTCA GCTAATTACC GTGCGTGGCT TTGGCCCCCA ATTTAATACG
GTATTGGTGA ATGGCCGTCA AATGGCGTCA GAAAACGACT CTCGCGCTTT TAGCTTCGAC
ACGATTGCTT CTGAGTTAGT AAGTAGCCTT GATGTGCATA AAACGTCAAC GGCCACAATG
CAGTCTGGTG GTGTAGGCTC TACTATAAAT ATTAATACCG CACGCCCATT TGCGTTAAAC
GGTTTTAAAA TGGCGGGTTC TGTAAAAGGC GTGTACGACG AAAATAGCGA AGAAACCACG
CCTCAATTCT CTGGCCTTAT CAGCAATACT TTTAACGATG ATACCTTCGG TGTATTGCTT
GCCGTCTCAC ACCAAGAACG TGAAACTCGC TTAAATCAGG CACAAATGGA CGGCTGGTTA
GAAAACGTCG GCGTACCAAA CCCCGTTACA CAGTCAGGCG AAGCTTGGAC AGGCAATGTA
TTTTCACCGC GCAACTACGA TCACAAAGTC ACCTTTGAAG AGCGCACCCG TACTAACGCC
AACTTAGTAT TCCAATACGC CCCTAACGAT AAGCTTGTGG TTACAGCAGA TGCCCTGTAT
TCCGATTTTG ACGTAGAGTC AGAAGCGACG TCATACGGCC ATTGGTTTAC CGCACCTAAC
ATTCAAGGGG TGGGTGATGA CGGTAGCTTA TTTGACGAAA ACGGCAATCG CCGCAGTCCG
ACAGTTGATG CAAACGGCAC CATTATCGAC TTGTATCAAG AGGTGGGTTT GGCGACAGAT
ATGCACGCCA AAACGTTCGA TCGTTTAACT GATACTTATG CCATCGGTCT GAACTTTGAT
TATCAGTACT CAGATAACTT AAACCTATCG TTCGATTTAA GTCATTCAGA AGCCGAACGC
GAAGCCAATA ACGGTGGCGG CGATCAGCTA TCACTTATTG GCTATGCCAA CCGCGTACGC
TTCCAAGTCG ACGACAATAT CCTGCCTGTT GCTAGCATGT TTGCCTCGCC AGATGCCAAT
ATTTATAGCG GTCAACAGGA GTTAGATGGC GCTATTGTTA CAGGTCCTGA CGGCTTCCCT
GCCTACAACG GTGCACTAAC CCCCGATGGC GTAAGCAATC ACCTTGATGA AGCTAACAGC
CGTGCCCACG TAATGCTGCG CCGCGGATGG GCAGTAGAAG ACGAAGTGAG CCAACTGCGA
TTTGACGGTG AGTACGTAAC CGACGGCAGC GGCTTAACCG AAATTCGCTT TGGTGCACAA
TACAGCACCG AAACCAAATC ACTTACGCGT TGGGACAATG AAGGTGTAGG CATACACTGT
ACTTACTGTG GTTATCCAGA TTTACCGGAA ATACCAGCAG GTAGCCAATA CGTTTTTGAC
GCGGGTAGCG ACTTCCTTTC TGACGTAAGC GGAAGCGGCC GTATGCCAAC CTCTTGGCTT
GCCCATGATG GCGAAGCCAA CTTTGCGTTT TTAGAATCTT ACTACCAAAG CGTAAACGGC
GAAGCTATTA GTTTTGATGC GGTACGCCGT AATAATAGCT TTGAAGTAGA AGAAGATATT
ATCTCAACGT ACCTTGAGTT CGATTTCGAA GGTGAAGTAG CCGACATGTT CTTAAGCGCA
ACTGCAGGCG TGCGCTATGA ATCAACCGAC GTCACGGTTA ACGGAACGCA AGCCCCAATA
ACAGGCTTAA CTATTCTAGA TCAAACCGAA ATGCTCGCGG GCTTTGGTGA TGCCCAAAGC
ATTGCCACTG AGTCTGATTA CGATGTTTTG TTGCCAAACT TCAGCGTACG TTTAGAAATT
ACCGACGATT TAATTGCGCG CTTTGCGGCA AGTTCAACCA TTACCCGCCC CACGCTAAAC
AGCATGTCGC CGGTAACGGT AATTACGACT ACCCGTCAAG GTGGCGACTT AACCTCAACC
AGTGGTAATC CTGCGCTAGA GCCGTTTAAG TCAGATAACT TAGACTTGTC GCTTGAGTAT
TACTACGACG AAGCAAGCTA TGCGTCAATT GGTTACTTCA GAAAGCTCGT ATCAAACTTT
ATTGTTAATA GCCAAGAAGA CAAAACCTTC GAGCTTGCTG ACGGCAGTCT GCTAACAGAC
CCGTCTACAG GAGCGAACGC AAGCGCACCA GATGCGGGTG ACGACGTGGC GGTGTTTACC
AATACGCTAC CCAATAACGG TGAAGACGCC ACGGTAGATG GCTTCGAACT TGCGCTTCAA
CACACCTTTG ATAACGGCTT TGGTGTACTG GCTAACGGTA CCATTGTTGA CAGTGACGCC
GAGCTAGACC CGTTCGATAT TAACCAAGTA TTTGCGCTAA CCGGTTTAAG TGATTCTTAC
AACTTGGTGG CATTTTATGA AACTGACGAC TATCAAATTC GTCTTGCCTA TAACTGGCGT
GACAAGTTTG TTCAGTCGTT GACACAAGGG CAGGGTGACG GCCCAACCAT TGTTGAGTCT
TATCAACAGC TTGACATTAG CGGTAGCTAC AGCGTGACAG ACAATGTAGA AATTTTCTTT
GAAGGTATTA ACCTTACAGA AGAATTTGTG CATAAACGCG GTCGCTTCTC TAATCACTTG
CTGTTGGTTG AAGACAGCGG CAGACGTTGG GCCTTCGGTG TGCGCGGAAA CTTTTAG
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| Protein sequence | MAAVLASAIS ANSAFAQNAQ PNNDVEVIEV SGIRSSVAKS MDVKRSSAGV VDAISAEDIG
DFPDTNLAES LQRITGVSID RSGGEGQLIT VRGFGPQFNT VLVNGRQMAS ENDSRAFSFD
TIASELVSSL DVHKTSTATM QSGGVGSTIN INTARPFALN GFKMAGSVKG VYDENSEETT
PQFSGLISNT FNDDTFGVLL AVSHQERETR LNQAQMDGWL ENVGVPNPVT QSGEAWTGNV
FSPRNYDHKV TFEERTRTNA NLVFQYAPND KLVVTADALY SDFDVESEAT SYGHWFTAPN
IQGVGDDGSL FDENGNRRSP TVDANGTIID LYQEVGLATD MHAKTFDRLT DTYAIGLNFD
YQYSDNLNLS FDLSHSEAER EANNGGGDQL SLIGYANRVR FQVDDNILPV ASMFASPDAN
IYSGQQELDG AIVTGPDGFP AYNGALTPDG VSNHLDEANS RAHVMLRRGW AVEDEVSQLR
FDGEYVTDGS GLTEIRFGAQ YSTETKSLTR WDNEGVGIHC TYCGYPDLPE IPAGSQYVFD
AGSDFLSDVS GSGRMPTSWL AHDGEANFAF LESYYQSVNG EAISFDAVRR NNSFEVEEDI
ISTYLEFDFE GEVADMFLSA TAGVRYESTD VTVNGTQAPI TGLTILDQTE MLAGFGDAQS
IATESDYDVL LPNFSVRLEI TDDLIARFAA SSTITRPTLN SMSPVTVITT TRQGGDLTST
SGNPALEPFK SDNLDLSLEY YYDEASYASI GYFRKLVSNF IVNSQEDKTF ELADGSLLTD
PSTGANASAP DAGDDVAVFT NTLPNNGEDA TVDGFELALQ HTFDNGFGVL ANGTIVDSDA
ELDPFDINQV FALTGLSDSY NLVAFYETDD YQIRLAYNWR DKFVQSLTQG QGDGPTIVES
YQQLDISGSY SVTDNVEIFF EGINLTEEFV HKRGRFSNHL LLVEDSGRRW AFGVRGNF
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