Gene MADE_03880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03880 
Symbol 
ID6777028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp4179096 
End bp4179464 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content48% 
IMG OID642757331 
ProductABC transporter ATPase 
Protein accessionYP_002128164 
Protein GI196158675 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGCCG GACTCTCAAA CAATGAAACC CGCCAGCGTG CTCTGGAATT GTTGACCGCT 
TTAGATGTTC AGCACAGAGC CCGCGCCATG CCATCACAAC TATCTGGAGG AGAACAACAA
CGCGTTGCCA TTGCACGAGG TTTAGTAAAC CGTCCACCGG TGATCCTGGC AGATGAGCCC
ACTGCGCCGC TCGATAGTGA ACGAGCGATG GCGGTCATTC GTATTCTCAA TAAGATGGCC
AGAACCTTTG AAACCGCCAT TATTGTGGTA ACCCACGATG AAAAAATTAT TCCAACCTTT
AAACGTATTT ATCACATTAG AGATGGTGTG ACACATGAAG AAGCGGGTGA AGGTCTAAGT
TTCATATAA
 
Protein sequence
MLAGLSNNET RQRALELLTA LDVQHRARAM PSQLSGGEQQ RVAIARGLVN RPPVILADEP 
TAPLDSERAM AVIRILNKMA RTFETAIIVV THDEKIIPTF KRIYHIRDGV THEEAGEGLS
FI