Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03880 |
Symbol | |
ID | 6777028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 4179096 |
End bp | 4179464 |
Gene Length | 369 bp |
Protein Length | 122 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642757331 |
Product | ABC transporter ATPase |
Protein accession | YP_002128164 |
Protein GI | 196158675 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGGCCG GACTCTCAAA CAATGAAACC CGCCAGCGTG CTCTGGAATT GTTGACCGCT TTAGATGTTC AGCACAGAGC CCGCGCCATG CCATCACAAC TATCTGGAGG AGAACAACAA CGCGTTGCCA TTGCACGAGG TTTAGTAAAC CGTCCACCGG TGATCCTGGC AGATGAGCCC ACTGCGCCGC TCGATAGTGA ACGAGCGATG GCGGTCATTC GTATTCTCAA TAAGATGGCC AGAACCTTTG AAACCGCCAT TATTGTGGTA ACCCACGATG AAAAAATTAT TCCAACCTTT AAACGTATTT ATCACATTAG AGATGGTGTG ACACATGAAG AAGCGGGTGA AGGTCTAAGT TTCATATAA
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Protein sequence | MLAGLSNNET RQRALELLTA LDVQHRARAM PSQLSGGEQQ RVAIARGLVN RPPVILADEP TAPLDSERAM AVIRILNKMA RTFETAIIVV THDEKIIPTF KRIYHIRDGV THEEAGEGLS FI
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