Gene MADE_03653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03653 
Symbol 
ID6777205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand- 
Start bp3939225 
End bp3940274 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content47% 
IMG OID642757106 
Productputative nitrate ABC transporter, permease protein 
Protein accessionYP_002127939 
Protein GI196158450 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID[TIGR01183] nitrate ABC transporter, permease protein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCGGG GCAAACACAG TGCACCAGCG CTTAATCAAT GTCAGGAGCA AGCAATGAGC 
AAGATGACTA CCATTCTTCG TCTTCCAACC TCGCCGTCTA ATGCTAATTC AATGGCGAGT 
CGGCTATACC AATCCACCCC TGCCTTGTTG CTGCCTGTTA TCGGTTTGCT AATGTTTTTG 
GCTATTTGGA ATGGCGTCGC GAAAAGTATT GATACCTCGC TAGGGCAATT TCCTGGCCCG 
GTACAGGTTT TTGAACAGAC GGGGGCATTA ATTGATGAAC ATATTGCACA GCGTGAAAAG 
GCCGCGGCAT TTTATGAACG TCAAGAGGCG AGAAACGCAG CTCGCGTAGC TCAAGACCCC 
ACTTATGAGC CAAAAATAAG AGATTTTACC GGTGCGCCGA CCTTTTTTGA CCAAATATGG 
ACAAGTCTAT ACACCGTAAT GGTGGGCTTT TTTATTGCAT CAGTGGTAGC GGTACCGGTG 
GGAATACTGT GCGGGTTGAG CAAGTCTGCC TATACGGCGA TTAACCCCTT AATTCAATTA 
TTCAAACCTG TGTCGCCATT AGCGTGGTTG CCCTTAGTGA CTATGGTTGT GAGTGCGCTT 
TACGTTAGCG ACGATCCCGC GTTTTCAAAG TCTTTCGTCA CTTCGGCTTT TACCGTGTCG 
CTTTGTTGCT TGTGGCCTAC GCTTATTAAC ACGGCGGTAG GCGTATCAAA CATTGATAAA 
GACCTCATCA ACGTGAGTAA AGTATTGCGA CTAACGCCTT TAGCGCACCT AACTAAAATT 
GTTCTGCCAT CGTCAATACC TATGATCTTT ACTGGCCTTC GCCTGTCCCT TGGCATTGGC 
TGGATGGTGC TTATTGCCGC TGAAATGCTC GCTCAAAACC CAGGGTTAGG CAAGTTTGTA 
TGGGATGAGT TTCAAAACGG CAGTTCAGAA TCGTTAGCCA GAATTATGGT GGCAGTGCTG 
ACCATTGGCG TAATAGGCTT TGTATTAGAC CGCTTAATGT TATCAATTCA GCGCGCTGTA 
AGCTGGGACA AGTCGAGCGT ACTACGCTAA
 
Protein sequence
MQRGKHSAPA LNQCQEQAMS KMTTILRLPT SPSNANSMAS RLYQSTPALL LPVIGLLMFL 
AIWNGVAKSI DTSLGQFPGP VQVFEQTGAL IDEHIAQREK AAAFYERQEA RNAARVAQDP 
TYEPKIRDFT GAPTFFDQIW TSLYTVMVGF FIASVVAVPV GILCGLSKSA YTAINPLIQL 
FKPVSPLAWL PLVTMVVSAL YVSDDPAFSK SFVTSAFTVS LCCLWPTLIN TAVGVSNIDK 
DLINVSKVLR LTPLAHLTKI VLPSSIPMIF TGLRLSLGIG WMVLIAAEML AQNPGLGKFV 
WDEFQNGSSE SLARIMVAVL TIGVIGFVLD RLMLSIQRAV SWDKSSVLR