Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03643 |
Symbol | |
ID | 6777068 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 3931058 |
End bp | 3931846 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642757096 |
Product | hypothetical protein |
Protein accession | YP_002127929 |
Protein GI | 196158440 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000329012 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGACAATA AAGGCCGCCT ACATCAGCAG TTTTATCGCA ATAGCCCAAG TCATAGGGAT GGCGCAGACG TTTCCTTTCA AGACATTCGC AAACTGTTCA ATTTTGCCAC CATCACGGTT GGCCGATGGG TAACCGCTGA AGAACAGCAG ATCGCAGCGA ATCTTTTTTT TGATGCCCTT TACGATCTAG TTGCGATCTT AAATATAAAT GAACAGGTGC TCTCGCTAAA CGGATCCCTT TCTCTTGCGT TTGGCAGTGG CGGCCAAAAA CACAGCAGCG CGCATTACAA TAGTGCAAAG CGACAGCTTG CCTTGGCGAA AAACGCGGGT GCCGGTGCGT TGGCTCATGA GTGGTTTCAC GCGTTCGACC ACTACATTGC GCCTCGTATG TTTGAAGGCA TAGCTGCAGG CAGTTTTGCA ACACAGGCGT GGCTAGACAA TGCGCCTATG AACCCTCATC CATTGAATCA AAAATTGAGC GATTGCTTCT CACTTTTGTT TTTAAATGAT CAAAAAAGGC CAAATGAGTA CTTTGTACGA TCCGTAGAAG CTGATCGCGC GCTAAAAATG TATTATTATG CTATGCCTCA GGAGATGGCT GCCCGAGCAT TTGAAGCCTG TATTCAAGAT CACGAGATCA AAAATGCGTT TTTGGTGCAA GGTACAAAAA AATCAACGGA AGCTAGACTT GGCATTTATC CTCATGGTAA CTTGCGTACA TCACTCAACC AGGCATTGAT GTTGTATTTT TACCAATTAG GTGTCGCTAT TTCACGCAAA CAAACCTAG
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Protein sequence | MDNKGRLHQQ FYRNSPSHRD GADVSFQDIR KLFNFATITV GRWVTAEEQQ IAANLFFDAL YDLVAILNIN EQVLSLNGSL SLAFGSGGQK HSSAHYNSAK RQLALAKNAG AGALAHEWFH AFDHYIAPRM FEGIAAGSFA TQAWLDNAPM NPHPLNQKLS DCFSLLFLND QKRPNEYFVR SVEADRALKM YYYAMPQEMA ARAFEACIQD HEIKNAFLVQ GTKKSTEARL GIYPHGNLRT SLNQALMLYF YQLGVAISRK QT
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