Gene MADE_03562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03562 
Symbol 
ID6778099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand+ 
Start bp3841428 
End bp3842120 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content43% 
IMG OID642757010 
Productputative secreted protein 
Protein accessionYP_002127848 
Protein GI196158359 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCTCTT TTAACCCTAA CCTTTGTGGT ACTTGGATGA AATATAAGAC ACTTTTTACC 
GCCCTTCTTC TTATGGCTTG TTCAGGTATG GCCTTAGGAC AAAATGCCCA AACCGCTAGC 
TTTTCTATCA CGCTGAATGA TAGCGATGGT GAGCCTGTCG ATAACGGCGT ATTTCTATTT 
GAGCCGCAGT TTGAGGTGGA TGAGCATCAA ATGCCACACC AAAAGCCAGC CGTAATGAAT 
CAAATAGATA AACAGTTTGA ACCTCACGTG CTTGTGGTAA AAGCGGGTAC TGAAGTGACT 
TTCCCTAATG CGGATAATTT GTTTCACCAC GTCTATTCAT TTTCACCTAC GAAACAATTC 
GAACTAAAGC TTTATAAAGA GTTTACGGCA GAGCCTTTAC GCTTTGAAAA TGCAGGTATT 
GTGGATATTG GCTGTAATAT TCATGATTGG ATGTTAGGGT ACATTGTTGT ATCCGACTCG 
CCGTATTTTG GAAAAACCAA TACAGAGGGG CAATCTTTAG TCTCGCTACC CCACGGTGAA 
TACACCGTCC GTTTTTGGCA TCCCGAAGTG GAAGGTGAAA AAGCGCTCCC TCCACAGTCC 
ATTTCTGTGT CTACCGATAC TCAAGTAACA TGGGCGCTTA ATACAACCAT AAGCCTTGAC 
GATGAGTTTG ATTCAGCTTT CGGCGACTAT TAA
 
Protein sequence
MLSFNPNLCG TWMKYKTLFT ALLLMACSGM ALGQNAQTAS FSITLNDSDG EPVDNGVFLF 
EPQFEVDEHQ MPHQKPAVMN QIDKQFEPHV LVVKAGTEVT FPNADNLFHH VYSFSPTKQF 
ELKLYKEFTA EPLRFENAGI VDIGCNIHDW MLGYIVVSDS PYFGKTNTEG QSLVSLPHGE 
YTVRFWHPEV EGEKALPPQS ISVSTDTQVT WALNTTISLD DEFDSAFGDY