| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03456 |
|---|
| Symbol | |
|---|
| ID | 6776959 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | - |
|---|
| Start bp | 3728447 |
|---|
| End bp | 3729262 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 642756904 |
|---|
| Product | 11-domain light and oxygen sensing his kinase |
|---|
| Protein accession | YP_002127742 |
|---|
| Protein GI | 196158253 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2203] FOG: GAF domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000206574 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTATCA TAAAAGAACT ACAAACAATA TCTAATGACC ATTCATTGTC GTTAGATAAA
AAACTCGAGA GCTTGCTGCG CATGGGCACG GAAATTCTCG GGTTAGAAAC AGGGATTGTA
AGTAATATAC GCGGCGAACA ATACAGCGTG CTTAGCGTGG TAACACCAGA AAACAACATT
CAGGTAGATT CTCTTTTCAG CTTAACTGAA ACCTACTGTG CTGATGTTGT AAAATCGAAT
TCATTCATTG CTTATCATAA TATTGATGTC TCGCCGGGTG CTTCCCACCC TTGTTTCGAA
AAATACACGC TTAAAAGTTA TTTGGCGTCG CCTATTTATG TTTCTGGTGC GTTTTTCGGC
ACGGTTAACT TCTCTTCGCT TGACCCAAGG GAAGCACCTT TTTCCAATTT AGAGCTAGAC
TATTTGCTGT TGCTTGCATC ATGGGTTGGA AACGAACTTG AAAGGCAGCA GGCTCTCAAT
AATCTTAATG CACAAAAAGC GGTGCTGACA GAGCGAAACT CATTACTCAA TCAAGTAGCG
AACCTAGCGG GCGTTGGCAC GTGGGAACTT AATGTAGAAA CACGGGCGAT AACCTGGTCT
GGCGCGCTAA GACGTATGCT GCACGTTCAT GGTGATAAAA TTCTGAAGCC CGAAGATATC
ACCAAATTCA TTGTAGACGA TACACAGCGC AAGATTTACT TAGAGCAATT CACACAAATG
ATGAAGTCTG ACGAAGACTT TGCGTACGAA TTAGAGGTGC GCACAGACAC TGGCGAAACC
CGCTGGTTAG AGAGTCGAGC TCATCCCGGT ATTTGA
|
|---|
| Protein sequence | MSIIKELQTI SNDHSLSLDK KLESLLRMGT EILGLETGIV SNIRGEQYSV LSVVTPENNI
QVDSLFSLTE TYCADVVKSN SFIAYHNIDV SPGASHPCFE KYTLKSYLAS PIYVSGAFFG
TVNFSSLDPR EAPFSNLELD YLLLLASWVG NELERQQALN NLNAQKAVLT ERNSLLNQVA
NLAGVGTWEL NVETRAITWS GALRRMLHVH GDKILKPEDI TKFIVDDTQR KIYLEQFTQM
MKSDEDFAYE LEVRTDTGET RWLESRAHPG I
|
|---|
| |