Gene MADE_03397 details

Gene Information

• Locus tag: MADE_03397
• ID: 6778882
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Alteromonas macleodii 'Deep ecotype'
• Kingdom: Bacteria
• Replicon accession: NC_011138
• Strand: +
• Start bp: 3654895
• End bp: 3655542
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 642756845
• Product: TPR repeats containing protein
• Protein accession: YP_002127683
• Protein GI: 196158194

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGAAAA AGAATTTCTT CTCTCCTTTT CTATTCATCC TTATTACTAC GTTGTCGATA 
TCTACGGTTC ATGCAAGCAC CCCTGATTTA CTACCGTTAC AACACGCGTG GGCAAAAGCG 
AACTATAAGC TTGAAGGTAA AGCCCAATTA GAGGCATTTT CTGCACTGAT TGCGCAGGCG 
AAAGTGTTAG TCGAGCAATC AGAAAATAGC GCTGAAGCAC TGACCTGGCT AGCTATCTCT 
CAATCAAGTA CTGCAAGTGC GAAAGGCGGT TTAGGTGCCC TGGACTTTGC TGAAAGTGCG 
AAGGAAAACT TAGAACGTGC CATTGAAAAA GAGGAAGCGG TATTAGAGGG GACGGCACTC 
ACTGTATTAG CGGCACTTTA TCATAAAGTA CCAGGCTGGC CAGTTAGCTT TGGAAGCGAT 
AAGAAAGCAA AACAATTATT TAAGCGCGCA TTGGAAATTA ACCCAGAAGG TATGGACCAA 
AACTTCTTTT ATGCTGAGTT TCTTTTCGAC GATGGTGAAT ACGAAGAAGC CCAAGGTTTT 
TTAATCCGTG CTCAAAACGC GCCTGAAAAA GCCAACCGCC CTCTAGCCGA TAAAAAACGC 
AGAGAAGAGA TTGCTATACT TCAGGCAAAA TTGGATAAAA AAGCATAG 

 

Protein sequence

MQKKNFFSPF LFILITTLSI STVHASTPDL LPLQHAWAKA NYKLEGKAQL EAFSALIAQA 
KVLVEQSENS AEALTWLAIS QSSTASAKGG LGALDFAESA KENLERAIEK EEAVLEGTAL 
TVLAALYHKV PGWPVSFGSD KKAKQLFKRA LEINPEGMDQ NFFYAEFLFD DGEYEEAQGF 
LIRAQNAPEK ANRPLADKKR REEIAILQAK LDKKA