Gene MADE_03396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03396 
Symbol 
ID6777262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand+ 
Start bp3654005 
End bp3654706 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content46% 
IMG OID642756844 
ProductTPR repeats containing protein 
Protein accessionYP_002127682 
Protein GI196158193 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAT TAACCACGCT TAGCACCACG GTAATTCTAG GACTCGGTCT GGCATTAAGC 
CATACGGCTA TGGCTCAAGC TAACGAGGTC ACAGAAAGTA CAGCGCCGAC ATCTGCCTTA 
AGTGAAACAG CAACCAACCC GTTAAAGACA CTTCAGCATC AGTGGGCACA TATTAACTAT 
GAACTTGATG ATGCAGAAAA GGAAAAAGCA TTCGTCGCCC TTATTAATAC CGCTAAATCT 
TTCGTTAAGG CAGAACCCAA CAACCCTGAA CTATTGATTT GGCAAGGCAT AATTCAATCC 
AGTACAGCCG GTGCCAAGGG CGGACTTGGT GCTCTGGACT TCGCAAAGGA TGCTCGTAAG 
AGTTTTGAAC AAGCAATGCG ATTGGACGAA AACGCACTCT CTGGCTCTGC GATGACCAGT 
CTAGGTGTGC TGTATCATAA ACTTCCGGGC TGGCCTATTA GTTTCGGTAG CGACAAAAAA 
GCTGAGAAAT TGCTAAAGCA TGCGCTTGAA ATAAACCCTG ACGGAATAGA TCCCAACTAT 
TTCTACGCCG AGTACTTGTT CGATAATGGA AAATATGAGC AAGCGCTCAA GTTCGCCAAG 
AAAGCGCTCG ACGCCCCAGC GCGCGCTGAT CGTCCTATTG CAGATTCAGG TCGCAAAAGA 
GAGATCGCTT TATTGGAAGC GAAAATAGCG AGAAAAAGTT AG
 
Protein sequence
MKKLTTLSTT VILGLGLALS HTAMAQANEV TESTAPTSAL SETATNPLKT LQHQWAHINY 
ELDDAEKEKA FVALINTAKS FVKAEPNNPE LLIWQGIIQS STAGAKGGLG ALDFAKDARK 
SFEQAMRLDE NALSGSAMTS LGVLYHKLPG WPISFGSDKK AEKLLKHALE INPDGIDPNY 
FYAEYLFDNG KYEQALKFAK KALDAPARAD RPIADSGRKR EIALLEAKIA RKS