Gene MADE_03390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03390 
Symbol 
ID6777191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand+ 
Start bp3647554 
End bp3648231 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content45% 
IMG OID642756838 
Producthypothetical protein 
Protein accessionYP_002127676 
Protein GI196158187 
COG category[S] Function unknown 
COG ID[COG0398] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGACTA ATGTTCGCCG CCTCAAAAGC TTCATACAGT TTTTCATCGG GGCAGCTAGC 
ATCGCGCTTA TCTGCTATGT GTCGCTAGAG GTCACTGGTG AAGTATGGAA GCACGGTGAT 
GATACAGATT GGTTGAATGC CTATATTTCA AATTTAAATT GGCAATCGCT GTGCATGATA 
CTGGGTGGTT GTGTTGTACT TTTAACCATG GGTTTTCCCC GTCAGGCTGT CAGTTTTTTT 
TGCGGAGTGG GCTTTGGCGC ATTGCAGGGA GGATTAATTG CCTTGTTGCT AACGGTATTG 
TCTGCATGTG TAGCCTACGC ATTAGCAAAT GGCCCTCTGC GCTCACTCGC CGTCCGTCTT 
TTAGGTTCAA AATTAAAACC TGTTGAAAAC AAACTGGCCA AGCGAAGTTT TCGCAATGTG 
TTAATTGTTC GTTTATTCCC TGTAGGCTCA AACTTAATCA CAAACGCCGT CGCGGGTGTG 
CTAAGCGTTC CGTTTGTCCC GTTTATTCTG GCAAGTGCAA TCGGCTTTGC GCCTCAAACT 
TTTTTGTTTA CCTTGCTTGG AAGCGGTTCT CGATTTGTCA GTTCCCTTGA ACAGCCTTTA 
CAAATTGGTG GCTTAATCAT TAGCCTTCTT CTACTTCTAT CCTTATCAGG CATTTCTCGT 
AGGAGTGAGC CGTCGTGA
 
Protein sequence
MKTNVRRLKS FIQFFIGAAS IALICYVSLE VTGEVWKHGD DTDWLNAYIS NLNWQSLCMI 
LGGCVVLLTM GFPRQAVSFF CGVGFGALQG GLIALLLTVL SACVAYALAN GPLRSLAVRL 
LGSKLKPVEN KLAKRSFRNV LIVRLFPVGS NLITNAVAGV LSVPFVPFIL ASAIGFAPQT 
FLFTLLGSGS RFVSSLEQPL QIGGLIISLL LLLSLSGISR RSEPS