| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03374 |
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| Symbol | |
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| ID | 6777257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 3631471 |
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| End bp | 3632730 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 642756822 |
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| Product | Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| Protein accession | YP_002127660 |
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| Protein GI | 196158171 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.67607 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTATAAAG TTCTTGTAGT AGAAGACAGC TCGACTGTCC GAAAGATAGT TAATAAACTT
ATTGAGGATA ATCCTCACTT TACGTGTGAT CTGTGTGAAG ATCTGGCTGA GGCGAAAAGT
GCTCTTGAAA GTGACAATGA ATATTTAGCG GCTATTGTTG ATTTAAACCT TCCCGATGCG
CCTAACGGCG AAAGCGTTGA GTTAGCCCTT TCTTATAACT TACCAACGAT TGTATTGACT
GGTAATTTCG ATGAGTTCAC CCGCGCACAA TTGCTCGATC AAGGGGTATT AGACTACATA
ACCAAAGAGT CTCGCTATTC ATACCTTCAA GTTTCTAAAC TTGTGGATCG CTTAAGAAAG
AACTTAACCA CAAAAGTACT CGTGGTAGAA GATTCAAAAA CCAGCCGTAA CCACATTTGC
TCGTTACTCC GTAAATTTCA ATTTCAGGTG CACGAAGCCA ACGATGGTTT AGAAGCGCTG
GAAGTGCTAG ATAACCATCG AGATATTAAA ATGGTCATTG CTGACCACCG TATGCCTAAT
ATGGATGGCT ATGAGCTTGT TAGGACAATT CGTCACGAAA AACGCTTACA GGATTTGGTT
TTCATCGGTC TGTCCGCTTC CGGTGACAGC GTTTTAACTT CTAAGTTTAT CAAGAGCGGC
GCGAACGATT TTCTTTCTAA GCCTTTTTAT CACGAAGAAT TCTACTGCCG AATCATGCAG
AACCTTGAGT CTCAGGAAAT GATTCAAACT ATTCGCAATT CGGCTAATTT AGATCCGCTA
ACCAAGGTCT ACAATCGTCG CTTTCTTTAT GAAAAAGCAG ACGAGCTCTT CTCCCGCAAG
GCCACGAGAA GCAATGTGAT TGTTTCAATG ATTGATGCTG ATAATTTTAA AGGCGTTAAT
GATACCTACG GACACAAAAC CGGTGACGTG CTTTTACAAG AGTTCTCGGC CTTGATGAAG
GACTATTTCC CAGACGATCT TATTGTGCGT TACGGCGGAG AGGAGTTTAC GGTGGTGTCA
GTGAGACCGC CCAAAGTTTA CCTTTCTGCG CTCTCTGCAT TTATGGATGC AGTTCGCACA
ACACAATTCA CCAATCACAA ATTCAACATT ACCTGTAGTA TTGGCGTTTG CGCTGAAGAA
CACCCGAGCT TAGAGTCACA ATTAGAGGTG GCTGATGCCC GTTTATACAA TGCGAAACGT
GCAGGCCGAG ATCAAATAAT GCTCAGGGAT ACTGCTTCTA AATCCGCTCA GTTAGTCTAA
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| Protein sequence | MYKVLVVEDS STVRKIVNKL IEDNPHFTCD LCEDLAEAKS ALESDNEYLA AIVDLNLPDA
PNGESVELAL SYNLPTIVLT GNFDEFTRAQ LLDQGVLDYI TKESRYSYLQ VSKLVDRLRK
NLTTKVLVVE DSKTSRNHIC SLLRKFQFQV HEANDGLEAL EVLDNHRDIK MVIADHRMPN
MDGYELVRTI RHEKRLQDLV FIGLSASGDS VLTSKFIKSG ANDFLSKPFY HEEFYCRIMQ
NLESQEMIQT IRNSANLDPL TKVYNRRFLY EKADELFSRK ATRSNVIVSM IDADNFKGVN
DTYGHKTGDV LLQEFSALMK DYFPDDLIVR YGGEEFTVVS VRPPKVYLSA LSAFMDAVRT
TQFTNHKFNI TCSIGVCAEE HPSLESQLEV ADARLYNAKR AGRDQIMLRD TASKSAQLV
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