Gene MADE_03374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03374 
Symbol 
ID6777257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp3631471 
End bp3632730 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content43% 
IMG OID642756822 
ProductResponse regulator containing a CheY-like receiver domain and a GGDEF domain 
Protein accessionYP_002127660 
Protein GI196158171 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.67607 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATAAAG TTCTTGTAGT AGAAGACAGC TCGACTGTCC GAAAGATAGT TAATAAACTT 
ATTGAGGATA ATCCTCACTT TACGTGTGAT CTGTGTGAAG ATCTGGCTGA GGCGAAAAGT
GCTCTTGAAA GTGACAATGA ATATTTAGCG GCTATTGTTG ATTTAAACCT TCCCGATGCG
CCTAACGGCG AAAGCGTTGA GTTAGCCCTT TCTTATAACT TACCAACGAT TGTATTGACT
GGTAATTTCG ATGAGTTCAC CCGCGCACAA TTGCTCGATC AAGGGGTATT AGACTACATA
ACCAAAGAGT CTCGCTATTC ATACCTTCAA GTTTCTAAAC TTGTGGATCG CTTAAGAAAG
AACTTAACCA CAAAAGTACT CGTGGTAGAA GATTCAAAAA CCAGCCGTAA CCACATTTGC
TCGTTACTCC GTAAATTTCA ATTTCAGGTG CACGAAGCCA ACGATGGTTT AGAAGCGCTG
GAAGTGCTAG ATAACCATCG AGATATTAAA ATGGTCATTG CTGACCACCG TATGCCTAAT
ATGGATGGCT ATGAGCTTGT TAGGACAATT CGTCACGAAA AACGCTTACA GGATTTGGTT
TTCATCGGTC TGTCCGCTTC CGGTGACAGC GTTTTAACTT CTAAGTTTAT CAAGAGCGGC
GCGAACGATT TTCTTTCTAA GCCTTTTTAT CACGAAGAAT TCTACTGCCG AATCATGCAG
AACCTTGAGT CTCAGGAAAT GATTCAAACT ATTCGCAATT CGGCTAATTT AGATCCGCTA
ACCAAGGTCT ACAATCGTCG CTTTCTTTAT GAAAAAGCAG ACGAGCTCTT CTCCCGCAAG
GCCACGAGAA GCAATGTGAT TGTTTCAATG ATTGATGCTG ATAATTTTAA AGGCGTTAAT
GATACCTACG GACACAAAAC CGGTGACGTG CTTTTACAAG AGTTCTCGGC CTTGATGAAG
GACTATTTCC CAGACGATCT TATTGTGCGT TACGGCGGAG AGGAGTTTAC GGTGGTGTCA
GTGAGACCGC CCAAAGTTTA CCTTTCTGCG CTCTCTGCAT TTATGGATGC AGTTCGCACA
ACACAATTCA CCAATCACAA ATTCAACATT ACCTGTAGTA TTGGCGTTTG CGCTGAAGAA
CACCCGAGCT TAGAGTCACA ATTAGAGGTG GCTGATGCCC GTTTATACAA TGCGAAACGT
GCAGGCCGAG ATCAAATAAT GCTCAGGGAT ACTGCTTCTA AATCCGCTCA GTTAGTCTAA
 
Protein sequence
MYKVLVVEDS STVRKIVNKL IEDNPHFTCD LCEDLAEAKS ALESDNEYLA AIVDLNLPDA 
PNGESVELAL SYNLPTIVLT GNFDEFTRAQ LLDQGVLDYI TKESRYSYLQ VSKLVDRLRK
NLTTKVLVVE DSKTSRNHIC SLLRKFQFQV HEANDGLEAL EVLDNHRDIK MVIADHRMPN
MDGYELVRTI RHEKRLQDLV FIGLSASGDS VLTSKFIKSG ANDFLSKPFY HEEFYCRIMQ
NLESQEMIQT IRNSANLDPL TKVYNRRFLY EKADELFSRK ATRSNVIVSM IDADNFKGVN
DTYGHKTGDV LLQEFSALMK DYFPDDLIVR YGGEEFTVVS VRPPKVYLSA LSAFMDAVRT
TQFTNHKFNI TCSIGVCAEE HPSLESQLEV ADARLYNAKR AGRDQIMLRD TASKSAQLV