Gene MADE_03313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03313 
Symbol 
ID6778599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp3572612 
End bp3573139 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content47% 
IMG OID642756761 
Producttranscriptional regulator, Cro/CI family protein 
Protein accessionYP_002127599 
Protein GI196158110 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCAAG CCACCCTTAA TATTCTAGGT AGGCATCTTA AGAAACTTAG GCAAGATAAA 
GGTGTCTCGC TGTCGCAATT AGCCGCAGGG GCAGGTATTG CCAAGTCAAA TCTTTCTAGG
CTAGAGCAGG GTAACGGTAA TCCTACGTTA GATACTATTT GGCGATTAGC TAAGCAATTA
GACGTGCCAT TTGGTCAACT TGTGCAGCCC CTTAGCACAA GCGTGGGAGA GAACGGAGTA
GAAGTGCGTC TCATTGAGCA AGGGCAGGGA GTACCCAATG TCGATGCTTA CTGGATGTCT
GTTGCACCTA ATACGCGGCG AGAAGCCGAG GCTCACGCGA CTGAAACACA AGAAACCATT
ACCGTGATAA GCGGTACGTT AGAAGCAGGG AATATTGGCA GTACCCAACT ACTGCTACCC
GGTCAAAGTA TTGCTTTCAG CGCCGATTTA CCTCACGTCT ACAAAACTCA AGATGAGTGG
GTAACGTGCC TTATCACTAT CGTTTATCAC AAAGAGGCAA TAAAATGA
 
Protein sequence
MNQATLNILG RHLKKLRQDK GVSLSQLAAG AGIAKSNLSR LEQGNGNPTL DTIWRLAKQL 
DVPFGQLVQP LSTSVGENGV EVRLIEQGQG VPNVDAYWMS VAPNTRREAE AHATETQETI
TVISGTLEAG NIGSTQLLLP GQSIAFSADL PHVYKTQDEW VTCLITIVYH KEAIK