| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03227 |
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| Symbol | |
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| ID | 6776947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 3486347 |
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| End bp | 3487216 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642756677 |
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| Product | regulatory protein AmpE |
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| Protein accession | YP_002127515 |
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| Protein GI | 196158026 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG3725] Membrane protein required for beta-lactamase induction |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0544057 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCTAA TGAGTTTACT GTTGGTTCTC AGCTTAGAGC GGCTGATATC CAAAACACCA
AGCTGGCATA TTGAAAAGTA TGCGTCCCAA TATCGCGATT TTCTGCAGAA AAAAGGGTGG
TTAGGTGAGA AAGCCTCTTC GGCGGCACTT TACTTTTACC TTTTAGTGCC CGCGTTATTG
CTAGGGGCTA TTGAATATTG GCTGCTAGGC GCTTTTCTTA CCTTTATTGA GCAAAGCATT
GTGCTGTTTA TCTGCATAGG TTGCCCAGTG CTTAGAGAAA TTTATAAGAA CTTCCTTAAC
GCTGCACAGC GAGGTGATCT GCAAGCCTGC AGCATGTATA CCGATCAGCT AGGACACTGT
GCAAGTCAAT CTGACAGCGA CGGCAGTGCA AGTGCAGAAG GAAAAAGCTT TGGCCAGCAC
CTTACATGGC TTAACTATCA GCATTATGCT GCAGTGATGT TGTGGTTTAT CGCGTTTGGT
GCACCAGGGG CACTTTTTTA CAGCATAAGT AGAAGCACTA CGGAAGCCTT ATGCGGGGCT
AATCACCCTT TAAAAGGAGC GGCGGGAAGA TTAATGTTTG CGCTCGACTA TATTCCGGTT
CGTGTGACGG CATTTGGTAT GTTGATGATG GGACATTTTT CCCGCGCCTT GCCAGAGTGG
CTCAGTCATG CGCTTCAATT TGATGTACCT GCGTATGATG TGCTTACCCA TATTTCTGCC
AAAGCTGAGG TTTTAACCCC TGAAGAGTAC CAAATGCAGG CTGAAAATGC AGCGATTGAG
CCGCGAGTAC TTGTAAAGTT AGCAAAACGT AATGTTATTT TTCTACTTGT TATCACCTCT
GCATTAACGC TGGTAGGCAG CCTCGCATAA
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| Protein sequence | MMLMSLLLVL SLERLISKTP SWHIEKYASQ YRDFLQKKGW LGEKASSAAL YFYLLVPALL
LGAIEYWLLG AFLTFIEQSI VLFICIGCPV LREIYKNFLN AAQRGDLQAC SMYTDQLGHC
ASQSDSDGSA SAEGKSFGQH LTWLNYQHYA AVMLWFIAFG APGALFYSIS RSTTEALCGA
NHPLKGAAGR LMFALDYIPV RVTAFGMLMM GHFSRALPEW LSHALQFDVP AYDVLTHISA
KAEVLTPEEY QMQAENAAIE PRVLVKLAKR NVIFLLVITS ALTLVGSLA
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