Gene MADE_03139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03139 
Symbol 
ID6778081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp3392192 
End bp3392728 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content42% 
IMG OID642756589 
Productthioredoxin peroxidase 
Protein accessionYP_002127427 
Protein GI196157938 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATACAC AAAAAATGCA CCCAGCCGCC ACTTTTCCTG AAGTTAGCGT TACATTATCA 
ACTGGTGAAA CGGTATCGTT GACTAACAAA GAAGAGGGAT GCGACTGGAA AATGGTCGTC
GTTTTTCGCG GCAAGCATTG CCCGATCTGT ACTAAATACT TAAATAAACT CGAAGACTTC
ACTGGCCGCC TTCGTGAAAT GAATATTGAT GTAGTTGCAG TAAGCGGCGA TAGCAAAGCA
CAGCTTGACG AACATCTTGA TGAGCTATCC ATAAACTTCC CTATTGCATG TGGTTTATCA
CAAAGTGATA TGGAAAAGCT TGGCTTATAC ATTTCTGAAC CACGCTCAGA AAAAGAAACC
GATCATAACT TCGCTGAACC CGCGTTATTT GTGCTTAACA GTGACAACGA AATTCATATT
GCTGAAATTG CCAACGCGCC TTTTGTTCGT CCGGATTTGG AACAGTTGGT GTCGGGCTTA
GAGTTTATTC GTAACCCCGA TAACAATTAT CCTATTCGCG GCACGCTTAA AAGCTAA
 
Protein sequence
MYTQKMHPAA TFPEVSVTLS TGETVSLTNK EEGCDWKMVV VFRGKHCPIC TKYLNKLEDF 
TGRLREMNID VVAVSGDSKA QLDEHLDELS INFPIACGLS QSDMEKLGLY ISEPRSEKET
DHNFAEPALF VLNSDNEIHI AEIANAPFVR PDLEQLVSGL EFIRNPDNNY PIRGTLKS