Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03139 |
Symbol | |
ID | 6778081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 3392192 |
End bp | 3392728 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 642756589 |
Product | thioredoxin peroxidase |
Protein accession | YP_002127427 |
Protein GI | 196157938 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1225] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATACAC AAAAAATGCA CCCAGCCGCC ACTTTTCCTG AAGTTAGCGT TACATTATCA ACTGGTGAAA CGGTATCGTT GACTAACAAA GAAGAGGGAT GCGACTGGAA AATGGTCGTC GTTTTTCGCG GCAAGCATTG CCCGATCTGT ACTAAATACT TAAATAAACT CGAAGACTTC ACTGGCCGCC TTCGTGAAAT GAATATTGAT GTAGTTGCAG TAAGCGGCGA TAGCAAAGCA CAGCTTGACG AACATCTTGA TGAGCTATCC ATAAACTTCC CTATTGCATG TGGTTTATCA CAAAGTGATA TGGAAAAGCT TGGCTTATAC ATTTCTGAAC CACGCTCAGA AAAAGAAACC GATCATAACT TCGCTGAACC CGCGTTATTT GTGCTTAACA GTGACAACGA AATTCATATT GCTGAAATTG CCAACGCGCC TTTTGTTCGT CCGGATTTGG AACAGTTGGT GTCGGGCTTA GAGTTTATTC GTAACCCCGA TAACAATTAT CCTATTCGCG GCACGCTTAA AAGCTAA
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Protein sequence | MYTQKMHPAA TFPEVSVTLS TGETVSLTNK EEGCDWKMVV VFRGKHCPIC TKYLNKLEDF TGRLREMNID VVAVSGDSKA QLDEHLDELS INFPIACGLS QSDMEKLGLY ISEPRSEKET DHNFAEPALF VLNSDNEIHI AEIANAPFVR PDLEQLVSGL EFIRNPDNNY PIRGTLKS
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