Gene MADE_03100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03100 
Symbol 
ID6777883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand- 
Start bp3355435 
End bp3356430 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content46% 
IMG OID642756549 
Productresponse regulator 
Protein accessionYP_002127388 
Protein GI196157899 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG1776] Chemotaxis protein CheC, inhibitor of MCP methylation
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.303898 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTCTG TACTCGTATG TGACGACTCT CTGGTTGCCC GCAAGCAAGT GGCCAAGTGC 
CTTCCTCAAG ATTGGGAAGT AGCGGTCCAT TTTGCCAAAC ATGGGCAAGA AGCGCTGACG 
GCGCTGGCAG AGGGAAAAGG TGACCTTTTG CTGCTTGACC TTAATATGCC CGTTCTCGAT 
GGGTACGGCA CGCTGGAAGC AATTCAGAAG CAGGGCCTTA AGACGAAAGT TATTGTCGTA 
TCTGGAGATA TTCAACCAGA AGCTCATGAC CGGGTGACTT CCTTAGGTGC CTTAGATTTT 
ATTCGAAAGC CCGTTGACCC TAAAAAGCTG GCTGAGGTGT TAGATAAGTA CAATATTCTT 
CATGCTGAGG AAGAAGATGT TGTAGAAGCG TCCCCGCTAG ACCCGGATAT TCGCGATTGC 
TACCAGGAAA TTACTAACAT TGCTATGGGC CAAGCGGGTG ATCACCTTGC CCGTACAATG 
AACGTATTTG TAGAGCTGCC CATTCCTAAT GTAAATCTTA TTGAAGTCTC AGAGCTTCAC 
ATGATGCTTT CAGATATTGA ATGCCACGAG CAGGTTACCG CGGTATGCCA AGGCTTTTTG 
GGGCCGGGAG TGAGCGGTGA AGCACTGTGT ATTTTAAGCG ATTCAAGCTT TGATGATGTG 
GCTAAAATAC TTAATGTGGA AGGGGAAGTA GACGATCAAC TTCAGTTAGA GCTCTTGATG 
GACGCCGCCA GCATACTTAT TGGCACTTGC CTAACGGGTT TGGCGAACCA AATGGACATT 
AACTTCAGTC AGGGCCACCC CATAGTACTT GGCCAGCACC GCGCTATCAC TGAAATTATT 
GCCATGAATC AAATCAAATG GAAGCGTACC TTAGCGATAG AGCTTAGCTA TGGTCTAGAG 
GGCTACAACG TACAGTGCGA CTTAATACTT TTATTTACAG AAGAGTCGAT GAAGATGATG 
AATTCTAAAC TTGCCCACTT GTTGGAGGAT TTTTAA
 
Protein sequence
MFSVLVCDDS LVARKQVAKC LPQDWEVAVH FAKHGQEALT ALAEGKGDLL LLDLNMPVLD 
GYGTLEAIQK QGLKTKVIVV SGDIQPEAHD RVTSLGALDF IRKPVDPKKL AEVLDKYNIL 
HAEEEDVVEA SPLDPDIRDC YQEITNIAMG QAGDHLARTM NVFVELPIPN VNLIEVSELH 
MMLSDIECHE QVTAVCQGFL GPGVSGEALC ILSDSSFDDV AKILNVEGEV DDQLQLELLM 
DAASILIGTC LTGLANQMDI NFSQGHPIVL GQHRAITEII AMNQIKWKRT LAIELSYGLE 
GYNVQCDLIL LFTEESMKMM NSKLAHLLED F