Gene MADE_03065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03065 
Symbol 
ID6777757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp3315287 
End bp3316201 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content47% 
IMG OID642756514 
ProductSurface lipoprotein 
Protein accessionYP_002127353 
Protein GI196157864 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2853] Surface lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTGT CAAAATCACT CATCGCTGGG TTGATTATTG CCACGAGCTT CTTAGGCGGT 
TGTGCGAGTA ATAGCGCGCA AGAACAAGCT GATGTAGCTA GAACTAACAG CGCTGCTGTT
GATACATCCG ACCCCCGTGA TCCATTTGAA CCGGTAAACC GCAAGTTATG GGATTTTAAC
TGGGATGTGT TAGATGCCTA TATTTTGCGC CCCGTTACCG TTACCTATGT AACGGTAATG
CCTCAGGCCG CACGTACGGG CTTAGTAAAT ATTACGGATA ACCTGCAAGA ACCCGCGAAC
TTCCTAAACA ACATGTTTCA AGGAAAGGTA GATGACGGCT TAGACAGCCT GGCACGGTTC
CTTATCAATA CAACCGTTGG GTTAGTCGGC ACCTTTGATG TGGCGAGCAA AATAGGTATT
GAGCGCAAAG AAGAGCAGTT TGGAGAAACC CTGGCCGTAT GGGGGCTAGA TACGGGTCCT
TTCTTGATGC TGCCATTTTT AGGCCCCAGC GACCCTCGCA GCTTTACCGG TGACTATGTC
GACGGCTTCG CGTTTCCTAT GTCGCTGCTT GAGGGCTCTG TAAACCTAGC GCGTATCGGA
ATATCGGTAC TTGAAACAAG AGCGCAGTTG TTAGATCAAG AAGCGCAGTT AGAGCAGTCG
ATAGATGACT ATGCGTTTGT AAAAAATGCC TATTTTGAAA ACCTAGAGTT TCGTGTTACC
GATGGTAAGA GCGGTGATAA AGCCATAGAT GATGAGCAAT TAGATGACTT TGCTGATTTT
GAAGCGATGC TGGAGGGCGG CGATTTTGAC GACTATGATG GGGCAACTGA AGACGTTGAT
GAAGCCTCGC TTATAGAAGA CAAGCCAACC GAAAAGTCAA AGGCTGAAGA CAAGTCTGAG
GATGGCAACG AGTAA
 
Protein sequence
MDLSKSLIAG LIIATSFLGG CASNSAQEQA DVARTNSAAV DTSDPRDPFE PVNRKLWDFN 
WDVLDAYILR PVTVTYVTVM PQAARTGLVN ITDNLQEPAN FLNNMFQGKV DDGLDSLARF
LINTTVGLVG TFDVASKIGI ERKEEQFGET LAVWGLDTGP FLMLPFLGPS DPRSFTGDYV
DGFAFPMSLL EGSVNLARIG ISVLETRAQL LDQEAQLEQS IDDYAFVKNA YFENLEFRVT
DGKSGDKAID DEQLDDFADF EAMLEGGDFD DYDGATEDVD EASLIEDKPT EKSKAEDKSE
DGNE