| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03018 |
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| Symbol | |
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| ID | 6776808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 3267532 |
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| End bp | 3268086 |
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| Gene Length | 555 bp |
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| Protein Length | 184 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 642756467 |
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| Product | hypothetical protein |
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| Protein accession | YP_002127306 |
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| Protein GI | 196157817 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTTTTC ACCTATCAAA TGGGAAAGTA AAACAGACTC ACGCACTTAA CATGGTTATG
GGGTTTACTC TGTTGGAGGT ACTCATTGCG GTTTTACTTT TAAGCATATT GTCTATGATA
GCCGCCCCCT CTTTTCAGCG ATGGCAAGAG CGCCATGCTT TCAAGCATTT TGCTACCCAT
TTTGCGAACT TAGCAAGACA TGCACGCATT TACGCGCTCA CTCATAAAAA GCCTTTTTAC
CTCATTGCAA AAGTGGAAAA TACGCACTGC GTAATAATAA GTGATGACGA AAACTGTACC
TGCTCGACAC ACCAAAGTTG CGCAGTCAAT GACGCTGCTT ATTGGGAGCC TCCTACGCAA
TGGAGCACTC AACTTGCTAC CTTAAACGGT ACAGACAAAA CTGTTGCTTT CAATCAGCAT
GGTACGCTGA ACTTTGGTAG CAACACCACC TTCACACTAA ATAGTCAGCA CTTTAACGGG
AAAGTGACAA TTAACGCGCT GGGGCGAGTG AAACTATGCA GCGTGCAAAG CGTTGTTGGT
GTTGCGTCAT GTTAA
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| Protein sequence | MAFHLSNGKV KQTHALNMVM GFTLLEVLIA VLLLSILSMI AAPSFQRWQE RHAFKHFATH
FANLARHARI YALTHKKPFY LIAKVENTHC VIISDDENCT CSTHQSCAVN DAAYWEPPTQ
WSTQLATLNG TDKTVAFNQH GTLNFGSNTT FTLNSQHFNG KVTINALGRV KLCSVQSVVG
VASC
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