Gene MADE_02910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02910 
Symbol 
ID6779089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand- 
Start bp3159685 
End bp3160362 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content40% 
IMG OID642756359 
Productputative LmbE-like protein 
Protein accessionYP_002127200 
Protein GI196157711 
COG category[S] Function unknown 
COG ID[COG2120] Uncharacterized proteins, LmbE homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.00798316 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGAAG TTGTCTTGAT AGTTATTGCA CATCCAGATG ATGAAGCAAT TTCAATGGCA 
GGAACAATCT TTAAACACAC CGAACAAGGT GATAGTGTTG TAGTAATGTC GATGACCAAT 
GGAGTTGGTT CAAGATACGG CCAAGCTTCT TTTGATGTCG AGAACAGGAA GCAGGCTGCT 
AAGCTGGCAA GCAAAATTTT GGGTTTTGAG TGGGGCGATT GTTACAATTT TAATGATAAT 
GCAATGGATT CTTACCCCCT GATTGAAATT GTGAAAGTAA TCGAGAAAGC CAAACAAGAA 
GTCGGGCCTA CGATTGTTTA CACACATAGC GGTGCGGATT TGAATGTAGA TCATAGAGTT 
GTTGCTAATG CTGTGTTAAC TGCTTTTAGG CCTCAACCAA ATGAAATTTG TAAAGAGTTG 
AGATTATTTG AAGTGGCATC TGCAACGGAC TATGGTTGTG AAGCAATTAC AGGCAGATTT 
TCTCCTAATT TATACATCGA TATTACCAAC GAATGGCATA AAAAAGTTGA AGCATTGGCA 
GCCTATTGCG CTGAGATGAG GCAATATCCC CACAGCAGAT CGGTTCAATC TATCAAAAAT 
TTAACAAGAA TCCGAGGAAA TCAGGTTGGG TTAGAGTTTG CAGAAGCATT TGAAGTCGTG 
AGAAGAATTG AGCGATGA
 
Protein sequence
MKEVVLIVIA HPDDEAISMA GTIFKHTEQG DSVVVMSMTN GVGSRYGQAS FDVENRKQAA 
KLASKILGFE WGDCYNFNDN AMDSYPLIEI VKVIEKAKQE VGPTIVYTHS GADLNVDHRV 
VANAVLTAFR PQPNEICKEL RLFEVASATD YGCEAITGRF SPNLYIDITN EWHKKVEALA 
AYCAEMRQYP HSRSVQSIKN LTRIRGNQVG LEFAEAFEVV RRIER