| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02738 |
|---|
| Symbol | |
|---|
| ID | 6778868 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | - |
|---|
| Start bp | 2982255 |
|---|
| End bp | 2982467 |
|---|
| Gene Length | 213 bp |
|---|
| Protein Length | 70 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 642756184 |
|---|
| Product | putative Cold shock-like protein |
|---|
| Protein accession | YP_002127028 |
|---|
| Protein GI | 196157539 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1278] Cold shock proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.161159 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAATT CAGTAAACGG CACAGTTAAA TGGTTCAACG AAGAAAAAGG TTTTGGTTTC
CTAACACCTG AAGCTGGCGG CAAAGATGTA TTCGTACACT TCCGTTCAAT TGCTTCTGAC
GGTTTCAAAA CTCTTGCTGA AGGCCAAGAA GTTAGCTTTG AAGTTGAACA AGGCCAAAAA
GGTCCACAAG CTGCTAACGT AGTTGTTCGA TAA
|
|---|
| Protein sequence | MSNSVNGTVK WFNEEKGFGF LTPEAGGKDV FVHFRSIASD GFKTLAEGQE VSFEVEQGQK
GPQAANVVVR
|
|---|
| |