Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_02728 |
Symbol | |
ID | 6775159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 2970930 |
End bp | 2972312 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642756173 |
Product | MATE efflux family protein |
Protein accession | YP_002127018 |
Protein GI | 196157529 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0324679 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAAAA GTAACGCTAA ACAACGTACT TCCGACTTAT TGGAAGGAGA AATTGGTGCT ACGTTAAAGC GTATAACCAT TCCAATGATA TTGGGGATGG TTATGATGAT GAGCTTTGGG CTTATCGATA CTTTCTTTGT AAGTTTGTTG GGTACCGACC CACTAGCCGC AATTAGTTTT ACCTTTCCTG TTACGTTTAC CGTTATAAGC CTGAACATAG GGCTAGGTAT TGGTACGTCT GCCATTATAG GTAAACTACA AGGCAGCAAA GCGCTCACCA AGTCACAGCA CTATGCCACA GGCTCGATAA TGCTGTCTGT TTTATTGGTA GGCGCATTGG CGCTAATTGG TTTTTTTACC ATAGAGCCTG TGTTCAAAAT GCTCAATGCA ACAGAGAACT TGATGCCTTA TATCTTCGAT TATATGGGGC TTTGGTATTT ATCGAGCATT TTTTTGGCAA TGCCCATGGT AGGAAACAGC GTGCTGCGCG CGTGTGGTGA TACGCGCACG CCTAGTATAG TGATGGCGGC AGGAGGTGGG TTGAATGCAT TGCTAGACCC TATTTTTATT TTTGGGCTAG GCCCTGTTCC TGCGATGGGA ATAAAAGGGG CCGCATTAGC AACCTTTATT GCATGGATAG TGGGTGCTTT ATGGATTCTA TACATATTGG CAGTGCGCCG GAAGTTAATG CTGCCTCGAC TACTCTCGCT TAGTGAATTG CGCGAAAGTA GCCGCGAGAT CCTTAAAATA GGTTTACCTG CCGCTGGGGC AAATATGCTA ACTCCGGTTG CCGGCGGAAT CATGACTGCG GTAGTCGCAA GCTACGGCGC CGAAGCCGTC GCCGCGTGGG GAGTGGGTAA CCGAATGGAG TCCATTGCCA GTATTGTCGT GTTAGCACTG TCTATGACGC TTCCGCCTTT TATCAGTCAA AACGTGGGTG CTGGGCAGGT CAGTCGGGTT AAGGAAGCCT ATTCACTGAC GTTAAAGTTT GTGCTGATTT GGCAATTTCT TATTTTTCTC GTTATGTGGG GGCTCTCTAG CTGGATTGCG GTAGCGTTTG CAAACGAAGT TGAAGTGAGT GTGCTGATAC AACTGTTTTT AATGATAGTG CCGCTTGGAT ATGGCATGCA GGGTATTATT ATCCTCACTA ATTCATCGTT AAATGCGATG CACCGTCCTA TGACAGCGCT CACATTAAGT GTCATCCGCT TATTTGTTTT CTTCGTACCC ATCAGTGTCG CCGGAAGCTT TTTCTTTGAA CTTAAGGGAT TATTCGCAGG TACTGTCATT GCCAATGTTG CAATGGCATG TGTTTCTTTG TTTGTCTTTA AACGCGCTAT CGCTGACTTT GAGAACGATA CGTCACCTGT CAGTGAGCAA TAA
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Protein sequence | MIKSNAKQRT SDLLEGEIGA TLKRITIPMI LGMVMMMSFG LIDTFFVSLL GTDPLAAISF TFPVTFTVIS LNIGLGIGTS AIIGKLQGSK ALTKSQHYAT GSIMLSVLLV GALALIGFFT IEPVFKMLNA TENLMPYIFD YMGLWYLSSI FLAMPMVGNS VLRACGDTRT PSIVMAAGGG LNALLDPIFI FGLGPVPAMG IKGAALATFI AWIVGALWIL YILAVRRKLM LPRLLSLSEL RESSREILKI GLPAAGANML TPVAGGIMTA VVASYGAEAV AAWGVGNRME SIASIVVLAL SMTLPPFISQ NVGAGQVSRV KEAYSLTLKF VLIWQFLIFL VMWGLSSWIA VAFANEVEVS VLIQLFLMIV PLGYGMQGII ILTNSSLNAM HRPMTALTLS VIRLFVFFVP ISVAGSFFFE LKGLFAGTVI ANVAMACVSL FVFKRAIADF ENDTSPVSEQ
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