| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02662 |
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| Symbol | |
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| ID | 6777894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 2890173 |
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| End bp | 2892254 |
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| Gene Length | 2082 bp |
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| Protein Length | 693 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 642756103 |
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| Product | putative TonB-dependent receptor |
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| Protein accession | YP_002126952 |
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| Protein GI | 196157463 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.196813 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTTA GACTTACGAG TATTGCTACT GCGATAATTT TAAGCCCTGC TGCGTTCGCT
GCTGATATGG AAGATATTGA AAGACTAACG GTTGAAGGTA AATACCTTTC AGTAAATCAG
TCAAATTCAA TTAAAAGCCC AACGCCAATC ATAGATGTGC CGCAAAGCTT GTCGATAATG
ACGGCTGAAG AAATTACAGC TCGTGGTATT ACCAGCGTTG GTCAAATTAT CGATTACACG
CCAGGTGTTA ATACCTCTCA AGGTGAAGGT CACCGCGATT CTGTGGTATT TCGTGGTGTG
CGTTCAACGG CCGACTTCTA CTTAGACGGT AACCGCGACG ATGTGCAGTA TTACCGTGCG
CTCTACAACA TAGAACAAGT TGAAATTCTT CGCGGGCCAA ATGCGCTATT ATTCGGGCGT
GGCGGTACAG GTGGTATTTT AAACCGCGTA TCTAAAAAGG CTAAAACCGG TGAGCAATTC
GTTAACTACA ATGTATCTGC AAACACGTTT GGTGCGTATA ATCTTCAGTT AGATACCAAC
GTTGATACAG GCGACAAGTC AGCGCTTCGC ATTAACGCCA TGTACGAGAG TCTAGATAAC
CATCGCGACT TTTTCTATGG CGATCGCTAC GGTTTCAACC CAACGGCACG CTTTGAAGTG
AGCGACGACA CCATCGTAGA CCTGTCTTAT GAATACATCG ATCACGAGCG TTTTATTGAC
CGGGGTGTCC CGACTGCCAA CGGAGAGCCA GTTGAAGCGT TTGAAGACAT TGTATTTGGT
GACCCTGAAA ACAATTATCA AACCTTAGGT GCAGACGTGT TCCGTGCTAA CGTTGAACAT
ACGTTCTCTG ACAACCTAAA AGGTAACTTT AACGCGTTTT ACGGTGACTA CGACAAAGTT
TACTCAAACT TTTATGCAGC AGGCTACAAT GCTGATGCTA ACCAAGTAAC GTTGGATGGC
TACATAGATA ATACCCAACG CGAGAACCTA ATTTTATCTT CGAACTTAGT CGGTGAGTTT
ACAACGGGTA GTATTGAGCA CACGGTTATT TTTGGCGGTG AGGTGATTAA TACTAAATCG
AATCAAGACC GCTTTAACAC TGTATTTGAC TCTACTGGCG GTGATAGAGA AACATTTAAC
ATTTCACGCC CGTTAAGTTT CCGTGGATTA ACTGGTACAA ATGTTGATGG CGTGACAGTA
ACTGCAGACT TTTCTGATTT AAACGATGAT ACGCGCGTAG ATCTAGATGT TTACTCATTC
TACGTACAAG ACGAAATTGC GTTATCAAAG AACCTTGATC TTGTGGTAGG TGCGCGTTTC
GACAGTTTTG ATATTGAGGT CTTTAACGCG GACCCTGACG TACTTGAGAC GCGGAGTAGA
AAAGACGAAC AGGTGTCTCC ACGTGCAGGT ATTGTGTACA AGCCTCAAGA AAATATCTCA
ATTTATGCGA GCTACAGTGA GTCATTCCTG CCGCGCAGTG GCGAACAGTA TGCAAATATT
AATGGCGATG CAGATGCGCT TGACCCAGAC ACGTTCACTA ACCAAGAAAT TGGTATCAAG
TGGGACTTCA ATGACAGCAT GAGCTTTACC GCGGCTATCT TTGAAAACGA ACAGACGTCA
CTCGACAACG ACCCGAACGA CGTCGAACGC TTTATAGAAG TGGATTCAGA TATTTCAGGT
TTTGAAATCC AACTACAGGG ATATATCACT GACAAGTGGC ATATTACTGC GAACTACAGC
AACCTTGATG GCGAAAATGC CAGTGGTGTT GCGCTTCGAG AGCTTCCTGA AAATACGATG
TCGGTATGGA CAACTTATGA AGTCAATGAC GTATTTGGCT TTGGTATTGG TGCAACATAT
CAAGACGAAA GTTTTGTTGT AACAGGCGAA GACTCACCTG TACTACCTAG CTATACTCGC
GTTGATGCAT CAGCATATTA CACGCTTAGC GACAAGACGC GTCTTCAGTT AAACGTGGAA
AACTTAACCG ATACGCTCTA CTTCCCTAAT GCGCAATCTA CGCACCAGGC AACGGTTGGT
GCGCCAATTA ATGCTCGCTT GTCGTTGATT GGTTCTTTCT AA
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| Protein sequence | MKFRLTSIAT AIILSPAAFA ADMEDIERLT VEGKYLSVNQ SNSIKSPTPI IDVPQSLSIM
TAEEITARGI TSVGQIIDYT PGVNTSQGEG HRDSVVFRGV RSTADFYLDG NRDDVQYYRA
LYNIEQVEIL RGPNALLFGR GGTGGILNRV SKKAKTGEQF VNYNVSANTF GAYNLQLDTN
VDTGDKSALR INAMYESLDN HRDFFYGDRY GFNPTARFEV SDDTIVDLSY EYIDHERFID
RGVPTANGEP VEAFEDIVFG DPENNYQTLG ADVFRANVEH TFSDNLKGNF NAFYGDYDKV
YSNFYAAGYN ADANQVTLDG YIDNTQRENL ILSSNLVGEF TTGSIEHTVI FGGEVINTKS
NQDRFNTVFD STGGDRETFN ISRPLSFRGL TGTNVDGVTV TADFSDLNDD TRVDLDVYSF
YVQDEIALSK NLDLVVGARF DSFDIEVFNA DPDVLETRSR KDEQVSPRAG IVYKPQENIS
IYASYSESFL PRSGEQYANI NGDADALDPD TFTNQEIGIK WDFNDSMSFT AAIFENEQTS
LDNDPNDVER FIEVDSDISG FEIQLQGYIT DKWHITANYS NLDGENASGV ALRELPENTM
SVWTTYEVND VFGFGIGATY QDESFVVTGE DSPVLPSYTR VDASAYYTLS DKTRLQLNVE
NLTDTLYFPN AQSTHQATVG APINARLSLI GSF
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