| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02660 |
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| Symbol | |
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| ID | 6778253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 2886221 |
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| End bp | 2889391 |
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| Gene Length | 3171 bp |
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| Protein Length | 1056 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642756101 |
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| Product | putative multidrug resistance protein, AcrB/AcrD/AcrF family |
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| Protein accession | YP_002126950 |
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| Protein GI | 196157461 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.814389 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAACC AAAACAACAC GCAAAGCGGC ATCATTGCTT GGTTTGCTCG AAATTCTGTA
GCGGCGAACC TTCTCATGTT CTTTATCATT ATCATGGGTA TAGCGAGCTA CTTCACTATT
CAGCGCCAGA TGTTCCCCAA CATCGAAATA AACTATATCA CTATAGAAGC AACGTACCCG
GGCGCCTCGC CACAAGAAAT TGAAGAAAGT ATTTTCATTA AAGTAGAGGA AGCGGTTAAA
GATATTACTG AAATAAAGCG CACAGTCTCT CGTGCATTTA GAGGTGGCGG CGCTGTAACG
TTAGAAATCG ACACCAAAGC CGAGCTTACT GACGTGCTAG ATAAGGTAAA GCTTCGCGTA
GACAGCATTG CCACTTTCCC CGCTGGCATG GAGCCAGTAA ACGTATCGCA AGTTGAATTT
CAACAGCAAG TTATTGAAAT GCCCCTAGTG GGCGACTTAC CGCTTTCCGA GTTAAAAGTT
CTCGCAAAAG AAGTTGAAGA TGAACTTTTA CAGTTAGGCT CTATTTCCCT TGTTGAGGCT
AATACGCCAG ATGATGAGAT TGCTGTTGAA GTTAAACCCG ATACGCTTAG AAAGTACGGG
CTAACGATTG GTGATATTAC CCAAGCCATT AACAGCTACT CGGCGAATAT CTCGGCGGGT
CAATTAAGAA CAAACTCGGG CATCGTCTCT GTTCGTGTAG AAAACCAATA CTACAGCGGT
GATGAGTTTA AGCAAATTCC AATTAAAATT GGTGCTGGCG GTGCAAAGGT AACGTTAGGC
GATGTAGCCT ACATCAATGA TGGTTTTGAA GAGGGTGAGC GCTACTTCAA ATACAATGGC
ATGAACGCTA TTTACATCGC AGTGAAAGCC ACAAAAACGC AAAATACCAT TCCCGTAGCA
GAGACGGTAA AAGCCTATAT TGATCAGAAA AACGAAACCT TGCCTCAGGG TATAAGTTTA
CAGGTACTGG TCGATATGAC CTACTACCTA AATGCGCGCC TAGACATGAT GCTGTCAAAC
CTCATTCAGG GGTCAATTTT GGTGGCACTT ATGCTAACTC TGTTTTTGCG ATTCAGATTG
GCAGTATGGG TAATGGTCGG CCTCCCAGTC TGCTTCCTAG GTGCAATGAT GCTAATGCCC
GTCTTCGGCG TCAGCATTAA CATTCTATCG CTCTTTGCGT TCATTATGGT GCTGGGTATT
GTAGTAGACG ACGCTATCGT GATTGGCGAA AGTGCTTATA CTGAAATTGA AAGCAAAGGC
GGTGGTGTGG ATAACGTTGT TCGCGGTGCT AAGCGCGTAG CGACTCCTGC TACATTTGGG
GTATTAACCA CCATTGCTGT ATTCGCCCCA TTTACGTTAA GCAGCGGGCC AGAAGGTGCT
TTTTTCTATA ACATCGCAGT GGTAGTTATC TTGTGCTTGG TATTTAGTTT AATTGAGTCG
AAGCTTATTC TGCCCGCTCA CCTCGCTCAC ACTAAATTTT CTCCGGTAAA GCAAGACAGC
TGGCGTGCTC GCTTTAATAA ACGCTTCTTT GCATTTGTAA ACGGCCCTTA TAAACGCACC
GTGACCAAAG CCATTGAGTG GCGCTGGGCA GTGCTGATGA TGTTTGTAGC AATGTTTATG
CTAAGCCTCG GGCTTATAGG CGCAAACTAT GTACGTATGG TGCCAAATCC CAAAGTGCCT
CACGACTTCC CCAGCGTAAA AATAGAGATG AATGAAAACG TTTCAGACAT GACTACCATC
AACGCGCTTA AAATAGTTGA GCAGACCATT TTAGACGTAG AAGAACAAAT TATTGATGAG
TTTGGCCAAG GTATGATTCG AGACCGCCTT GCGTTTAATG AAGACAGAAC CGAAGGGCGT
ATATTAACGC CGCTAGTTAA TGAAGAAGAC CGCCCTATTG ACACCTTCGA ACTAGCGCGT
CGCTGGCGCG AAGCCATTCC TGAAATCACC GGCATGAAGT CTTTTACCGT GATTGACGAT
GTGAACGGCG ATGGTGATGA TGGTGAGTTT GGCTATCTAC TTTTCGGCCC TGATATCGAC
ACCCTTAACG CCGCAGGTCT TAAGTTTATT GAAATGCTTC AGCAGCAAGA AGGCCTGTTC
GATGTAAGCT CTACTATCGA CCCGCCAAGC AAAGAAGTGC AGATGACATT ACTTCCGGTG
GCTTACGACT TAGGCCTCAC GCTTTCGAAT ATCGCATCTC AAGTGGGTGC AGGCTTCTAC
GGTGGCGAAG CACAGCGCGT CATCCGTAAT GGCGAAGAAG TGAAAGTAAT GGTGCGCTAC
CCTGAACTTA CTCGTGAGCG TTTTGCAGAC TTAAAATACT CACTTATCAC TACGCCAAGC
GGACAAGAAG TTATGCTAGG TGACGTGGTA GCCCTAGAAG AAAAACCCGG CATTAGCTAC
ATTCGCCGCG AAGGTGGCTA CCGCAGCGTA TACATTTGGG GCAACATTGA TGAGGAAAAA
GTTGAGCCGA ATGAAGTGGT GACTGAAATT CAGGATAAAC TTCTGCCTCA GCTTAAAGAG
TTATTCCCAT CGGTAATGAC CGAGTTAGGT GGGGATATTG AAGAGCAGCA AGCCCAGCAA
AACGAGCAAA TTCTGTTTTT CTTAGCCGCG ATGATCATGG TGTATATCCT ACTCGCCGTG
CCGCTCAAAA GTTATGGGCA GCCGTTAATT ATTATGTCGG TGATCCCATT TAGCTTTACG
GGAGCAGTGT TTGGCCACTT TGTACTAGGG CTAGACTTAT CTATGATGTC GAACTTTGGC
CTTATTGCTG CTGCGGGTGT TGTGATAAAC GACTCGCTGG TAATGACTGA TTTTGTAAAT
CAGCGCCGCG CTCAAGGGTA CAGCATTAAA GAAGCGGTTA CCGAAGCAGG TACTGCCCGC
TTTAGAGCAA TCACTCTCAC CTCTATCACT ACGTTTGTAG GCGTATTGCC AATAATGTTC
GAAACCAGCT TACAGGCAGC ATTCGTTGTA CCCATGGCCG CGGCATTGGG TTTTGCCGTT
CTGTATGCCA CGTTGGTTAC GCTAATTTTG GTGCCTTGCT TATACCTGAT TCTGCTAGAT
TTACATGTTC CATATACGTT TATTAAAAGC AAAATTGTGC GCAAGAGGAA GTCTGATGGC
AGCGACAATA CTGTCTCCCC CCCTCCTCAG CCAAGTAGTT TAATTGACTA G
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| Protein sequence | MNNQNNTQSG IIAWFARNSV AANLLMFFII IMGIASYFTI QRQMFPNIEI NYITIEATYP
GASPQEIEES IFIKVEEAVK DITEIKRTVS RAFRGGGAVT LEIDTKAELT DVLDKVKLRV
DSIATFPAGM EPVNVSQVEF QQQVIEMPLV GDLPLSELKV LAKEVEDELL QLGSISLVEA
NTPDDEIAVE VKPDTLRKYG LTIGDITQAI NSYSANISAG QLRTNSGIVS VRVENQYYSG
DEFKQIPIKI GAGGAKVTLG DVAYINDGFE EGERYFKYNG MNAIYIAVKA TKTQNTIPVA
ETVKAYIDQK NETLPQGISL QVLVDMTYYL NARLDMMLSN LIQGSILVAL MLTLFLRFRL
AVWVMVGLPV CFLGAMMLMP VFGVSINILS LFAFIMVLGI VVDDAIVIGE SAYTEIESKG
GGVDNVVRGA KRVATPATFG VLTTIAVFAP FTLSSGPEGA FFYNIAVVVI LCLVFSLIES
KLILPAHLAH TKFSPVKQDS WRARFNKRFF AFVNGPYKRT VTKAIEWRWA VLMMFVAMFM
LSLGLIGANY VRMVPNPKVP HDFPSVKIEM NENVSDMTTI NALKIVEQTI LDVEEQIIDE
FGQGMIRDRL AFNEDRTEGR ILTPLVNEED RPIDTFELAR RWREAIPEIT GMKSFTVIDD
VNGDGDDGEF GYLLFGPDID TLNAAGLKFI EMLQQQEGLF DVSSTIDPPS KEVQMTLLPV
AYDLGLTLSN IASQVGAGFY GGEAQRVIRN GEEVKVMVRY PELTRERFAD LKYSLITTPS
GQEVMLGDVV ALEEKPGISY IRREGGYRSV YIWGNIDEEK VEPNEVVTEI QDKLLPQLKE
LFPSVMTELG GDIEEQQAQQ NEQILFFLAA MIMVYILLAV PLKSYGQPLI IMSVIPFSFT
GAVFGHFVLG LDLSMMSNFG LIAAAGVVIN DSLVMTDFVN QRRAQGYSIK EAVTEAGTAR
FRAITLTSIT TFVGVLPIMF ETSLQAAFVV PMAAALGFAV LYATLVTLIL VPCLYLILLD
LHVPYTFIKS KIVRKRKSDG SDNTVSPPPQ PSSLID
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