| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02658 |
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| Symbol | |
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| ID | 6778389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 2883809 |
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| End bp | 2884909 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642756099 |
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| Product | GGDEF domain protein |
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| Protein accession | YP_002126948 |
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| Protein GI | 196157459 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTGGGC CAATAAAGCA ATACGTATTA AGTGGTGTAA ACCGCCGCTA CAAAGATGAA
ACCAACCGCC GCATTATGGT TGTTAACCTG TTTGCAGCGG TGGGGATGTC TATTACGTTT
TTGCTTGGCT CTCGTGCTTT TATTGATGGC GAGTACTTCT TATCGACTAT TCTTTTTAGT
GCCAGTGTAA TATTTGCTCT CTCGCAGCGT TTACAGGTGC GCGTTGCTAC TGCAAAGGCG
CGCACCTGGT CTATTACGCT ATTAATTTTT TGCCTGATGG CTCTCACGCT TCTACTAGTG
ATAACTGGGG GCAAAGATAA TACGGGCCCG CTTTGGATAT ACCTTGTCCC CCCTGTCACT
ATGTTTTTTG CCGGTTTTAT TCGAGGGTTG CTCGCGCTTG TCGCCTATAC TATCGCGTGC
ACAATCGTGC TATTTGGGTT CAACGAGGCC GATTTTGTGG CCAACTATAG CTATGCGTTT
AAAACGCGCC TACTCTATTC ATTTGCTACA GTTACGTTCC TGTCAGCGTT TTACGAATAC
AGCAGACAAA AAAGTTACGA CACCGCGCTT TACTTAAGTG AGCAGTTTGA ACGCCAAGCC
AAACACGACC ACCTTACTCA ACTTTTAAAT CGCCGTGGAG CACAGCAGTG TCTTGAACGC
GAATATGCCA GAATGCAACG TAATAAGCGT CATTTTTCTA TAGCCATTGC TGATATAGAC
AGATTTAAGA GTATTAATGA CTCCCTCGGA CACGAGCAAG GTGATGAGGT ATTAAGGCAA
ATATCTAACA TTTTCAAAAC CCGCTCGCGG GGTCAAGACG TCTTGGCCCG CTGGGGCGGT
GAAGAGTTTA TGTTCATCTT TAACGATACG GATGAAGCTG GCGCGGTAAA AGCATTAGAA
CAAATAAGAG CGACCTTAAA TAACGCCCCT CTCAATATCA ATGGCAATGA AATCTATATT
ACAAGCAGCT TTGGTGTATG CGAAGTAACG CCGGACATTG ATACATCAAG CGCTATCCGC
CTCGCCGACA AAGCGTTATA TCACGCGAAA GAGCACGGCC GAAACCTTGT TTGCGCCGCC
TCTACACTTC CTTGTCGCTA A
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| Protein sequence | MLGPIKQYVL SGVNRRYKDE TNRRIMVVNL FAAVGMSITF LLGSRAFIDG EYFLSTILFS
ASVIFALSQR LQVRVATAKA RTWSITLLIF CLMALTLLLV ITGGKDNTGP LWIYLVPPVT
MFFAGFIRGL LALVAYTIAC TIVLFGFNEA DFVANYSYAF KTRLLYSFAT VTFLSAFYEY
SRQKSYDTAL YLSEQFERQA KHDHLTQLLN RRGAQQCLER EYARMQRNKR HFSIAIADID
RFKSINDSLG HEQGDEVLRQ ISNIFKTRSR GQDVLARWGG EEFMFIFNDT DEAGAVKALE
QIRATLNNAP LNINGNEIYI TSSFGVCEVT PDIDTSSAIR LADKALYHAK EHGRNLVCAA
STLPCR
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