| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02628 |
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| Symbol | |
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| ID | 6775975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 2850559 |
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| End bp | 2853462 |
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| Gene Length | 2904 bp |
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| Protein Length | 967 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642756069 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_002126918 |
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| Protein GI | 196157429 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCACT CTGACACATT CAAACCAGCG TTAATTGCGC TTTCCATCAC AGCAGCTTTG
CATAGCGGCG CCGTAAGCGC ACAAGAGACA TCCGAAGATG CAGAGGTGGA AGTTATTCAA
GTTTCCGGTA TTCGAGGCTC GTTGATGCGA GCGCAGGCTG TAAAAATGGA TAATGACTCG
ATAGTAGAGG CCATATCAGC CGAAGATATC GGTAAATTAC CCGACTCATC TATTGCAGAA
TCACTTGCTC GCTTGCCAGG CTTATCCGGT GAACGTGTTG GCGGCAGAAC GTCAGGTATT
TCGGTTCGCG GATTCAAGGA AGATTTTACG GGTACCTCTC TTAATGGGCG AGAGCTAATC
GGTATAGGTG ATAATCGCGG CGTTGAATAT GACCTTTATC CTGCCGAAAT CATGACCGGC
GCAACCATCT ATAAAACGTC AGATGCATCG CTTATCGTCC AAGGTATTGG TGGTACTGTA
GATTTGCAAA CCGTGCGTCC ATTAGCTGCA CAAGAAACCC TTACCGTTAC CGGCGTATAC
GAGCTTGGTG GTAATGATTC AGATAACCCT GAATTTGATA ACAGTGGCAA CCGCTTCGCT
CTGTCTTTTG TTGAAAAGTT TGCCGATGAC ACCGTTGGCC TAGCCCTCGC CATAGCGTCG
ACAGAGTCAC CCAGAAATGA AAGAAAATAC GGCGTATGGG GTTACGGTGA AAACGATGAC
GGTCAAATAC TTCCCTTTGG GCTCGACACC CAGGCCATAA GCCGCGTGCT TGAACGAGAT
ACCATTTCAG CCATACTCCA ATGGCGACCG ACAGATAGAT TAGATATCGT GTTTGATGCA
CTCGATATCG ATTATTCAGA CTCAGGTGTT ATCCGCGGGT TTATCGACCC CTTTGCAGCG
GCGAACGTAA GTGGTAGTGG CGTTAATAGC ACAGGCACAC AAATTAACGC CAACCCGGTT
TTGCGTACTG ACCCTGCGCA AAAAGACGGT GAACTTCAAA CTTTTGGCTT GAATATTAGA
TATGATGTTA ACGACGACTG GTCAGTTTCG CTTGATGTAG CCGATAGTGA ATCAAGCAAA
CGAGATTTGC GCGGGGAATC TTATGCGGGT TTAGCACGCT CTGGCGCGCT TACCAACGAC
GAACTGGGTT CGCGCCAATT TCAAATGAGT GCCGATGGCA TTTATTTTAC TGATAGCAGT
GGCCTTGATG CATTTTCAGA TCCCGCACTA TTGCAGTTAG CGGGGCCACA AGTATGGGGT
GGCGGAATGG CAAATATTGC CGACCAGTTT GCCACCGATG TTTTACAGGC AAACGGTCAG
CCTTACAGTT ACTTCAACGC ACAAGATGGC TTCTTAAATT TTGCTGACTT TGAAGAAGAG
TTAACTACGG CACGCTTTGA AGCTGTAGGC TATGTTGACT GGGGTATCTT CAATACACTT
ACCGCGGGCG TTAACTACAG CGACCGAAGC AAAGCAAAAG ATAATAAAGG CTTTTTTGCA
ACCGCGTCGT CTTACCCATT CTCCGAGGCC ATTCCATCTC AATATCTATA CAACGGTTTA
GCCGACCTTA CATGGGCAGG TATGGGGTAC GTTGTCGCTT ACGACGGCTT TGCCCCTTAT
AACGACGGCG AATACACCTT AAATGATGCG GGCCTTCTAG AGCCAGACCG ATTAGGTGAT
AGCTACACCA TTGACGAAGA AGTGACCACG CTTTACGCCC AGCTCGATTT CGAAACAGAG
GTCCAGGGCT TCAATGTCAA AGGTAATGTG GGCGCCCAAT ATGTTCAAAC AGACCAAAGT
TCAACCGGCT TCATCGGTAT CGTTGGCGAC AACTTTGCGG TGTGTGACGA CGATGGTAAC
CAAGTTGTTG ATGCAGACTG CATCATTACT GACGGAGACG ACTACTCTCA CTTTTTACCA
AGCCTTAACG TTAGCGTCGA GCTTAACGAA AATCGCTACT TGCGATTCGG TGCTTCAAAA
ACCATTAGCC GCGCCCGTAT CGATCAGATG AAAGCGTCGG GCTTTGTGAA ATTCGACCAA
AATATTGAAC TTATTGCCAC ACCTAATACT GAAGCGGCGG TAGAAGCGTA TGGATCGCCT
TGGTCTAAAT TCTCAGGAAA CCCAACCCTT CGCCCATTAG AGGCAAATAA TTTCGATATA
TCGTTTGAAA ACTATTTTGA CGGCGAAGGC TATGTGTCCG TTGCGCTCTT CTATAAAGAT
TTAGTTAATT GGACCCGCGA CGGCAACCAA CTTATTGATT TTACGAACGA TGTAACGAAT
GACGGCGCAA ACTATTTCAT TCCAGGCTTT CACGATAGGA TTATTGACGT AGCGGGCAAC
TACGGCCCTG AGGATACGCC ATACGAGGTA GGAGACTTAG TTACGCCTCC TGATCAAGGC
TTTTACTCGT TCTTCGAAGA TGGCCTTGAA GGTGAAATGA AAGGGATTGA GCTAACTGCC
AATATTCCTT TGCGAATGCT CGCCGACGCA TTAGATGGAT TTGGCATTGC AGCATCTGCC
ACGATTTTAG ACGCAGAACT TGAAGACGGC ACCGCTATTC CAGGTCAATC TGACAATACT
TACAGTATTA CCGCGTATTA CGAAATGAAG GGTTTTGAAT TCAGGGTTGC AGCAACCGAT
CGTTCTGAAT TTTTAACGTA TCAGCGTGGC GGCTCTAATA AAATTGAAGC GGCTACCCGT
GACGCCGTAA CGCAGGTAGA TGCGCAAATC AGTTATGACT TTGCTGACAG CGGCATGGAA
TACTTAGCAG GCTTAAGAGT CTCACTACAA GGGGTGAATC TTACCGACGA AAAAGAAGAA
ACCATTGATG GTAATGGCAT CGTTACGTTG CGCCGAGAGT TTGGCCCTTC TTATATGCTC
AATTTAAACT ACGCATTCTA TTAG
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| Protein sequence | MTHSDTFKPA LIALSITAAL HSGAVSAQET SEDAEVEVIQ VSGIRGSLMR AQAVKMDNDS
IVEAISAEDI GKLPDSSIAE SLARLPGLSG ERVGGRTSGI SVRGFKEDFT GTSLNGRELI
GIGDNRGVEY DLYPAEIMTG ATIYKTSDAS LIVQGIGGTV DLQTVRPLAA QETLTVTGVY
ELGGNDSDNP EFDNSGNRFA LSFVEKFADD TVGLALAIAS TESPRNERKY GVWGYGENDD
GQILPFGLDT QAISRVLERD TISAILQWRP TDRLDIVFDA LDIDYSDSGV IRGFIDPFAA
ANVSGSGVNS TGTQINANPV LRTDPAQKDG ELQTFGLNIR YDVNDDWSVS LDVADSESSK
RDLRGESYAG LARSGALTND ELGSRQFQMS ADGIYFTDSS GLDAFSDPAL LQLAGPQVWG
GGMANIADQF ATDVLQANGQ PYSYFNAQDG FLNFADFEEE LTTARFEAVG YVDWGIFNTL
TAGVNYSDRS KAKDNKGFFA TASSYPFSEA IPSQYLYNGL ADLTWAGMGY VVAYDGFAPY
NDGEYTLNDA GLLEPDRLGD SYTIDEEVTT LYAQLDFETE VQGFNVKGNV GAQYVQTDQS
STGFIGIVGD NFAVCDDDGN QVVDADCIIT DGDDYSHFLP SLNVSVELNE NRYLRFGASK
TISRARIDQM KASGFVKFDQ NIELIATPNT EAAVEAYGSP WSKFSGNPTL RPLEANNFDI
SFENYFDGEG YVSVALFYKD LVNWTRDGNQ LIDFTNDVTN DGANYFIPGF HDRIIDVAGN
YGPEDTPYEV GDLVTPPDQG FYSFFEDGLE GEMKGIELTA NIPLRMLADA LDGFGIAASA
TILDAELEDG TAIPGQSDNT YSITAYYEMK GFEFRVAATD RSEFLTYQRG GSNKIEAATR
DAVTQVDAQI SYDFADSGME YLAGLRVSLQ GVNLTDEKEE TIDGNGIVTL RREFGPSYML
NLNYAFY
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