| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02600 |
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| Symbol | |
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| ID | 6779011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 2822838 |
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| End bp | 2824397 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 642756041 |
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| Product | chain length determinant family protein |
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| Protein accession | YP_002126890 |
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| Protein GI | 196157401 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
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| TIGRFAM ID | [TIGR03007] polysaccharide chain length determinant protein, PEP-CTERM locus subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.283305 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGAAT TACAATCACT CTTTATATTA GGATCTGATT ACCTTAAAGG GATTTGGATC
AAAAAACGCT ATGTCATTAT TTGCAGTTGG CTTATCTGCC CAGCTGGTTT TTTATACGTC
GCTAATCAGC CTGATTATTA TGCGTCTAGC GCAACCGTTC ATGTCGACAC TCGCTCTATG
TTACAACCCT TGCTCCGCGG GTTAGCCATC CAGACCAACA AGGCTCAGGA GATTAGGTTG
ATGGCAAAAA CATTTTTCAC ACCTGAAAAT GTCGCGAAAA TCGCAAGAAA TTCAGATCTT
GACTTAACCA CAAAATCCGA TGCGCAATTT GATTCCCTTG TTAATAGACT GAAAAATCAG
ATTCAGCTAA GAAGCACCTC TAGGGATAAT ATTTATAGGA TCTCTTACAA TAACAGAAAT
CCGGCAGTGG CGCACCGTGT CGTGCAGGAA ACTCTTAACC TTTTTGTAGA GGGAGCTCTC
GGGGACAATA GACGAAATTC CGATAATGCA GAGCGATTTA TTGACAATGA AATTGCGGAA
TATGAAAACC GTCTCATGGA GTCTGAACAG CGGCTTGCGG ATTTCAAAAG GAATTACGCT
GATATATTGC CTGTTCAGGG GTCTTTCTAC TCTCGTTTAG CGAACGAGAA AAGTCGGCTT
TCTACAATAG AGCTAGAAAT AAAGCAAACA AAGAAAAAGC TAGAAGCCTT TTCCAAGCAA
CTCGCTAATG CAAAAACTCA GCTTTCAAGT GGCAATTCGG AAAACTCCGG CCTGTCTACG
CGCTACGACT CTAGAATTCG AAGTCTAGAG CAAAAACTTG ATGAACTTTC TTTAAGATTC
ACCGAGCAGC ACCCCGATGT AATTGAAACT AAAGCGCTAA TTGAAGCACT AGAGACGCGT
CGTTCGGAAG AAATTAAAGC ATTAGTTCGG GAGTCAGGCG AAGAGCCAGT GCAACTAAAT
GCACTCAGTA GAGACCTGAG CTTAGAGATG TCGAAACTAG AAAGCCAACT TGCTTCGCAA
TTAGTTCAGC GAGACGATAT TGCTTCACGT ATTTTAGAGC TCCAGTCTAA AATAGATCTT
GTGCCACAGA TAGAAGCGGA ATCGACAGCG CTTAATCGTG ACTATGGTAT TCTAAAATCC
AAATACAACT CACTTTTGGC ACGTAAAGAG TCTGCGGAAC TAGCGAAAAG AGCAGAGTTA
AGCGGCGAAG ATATACAATT CAAAATTTTA CAACCCCCAA AATTACCTAC TAAACCTGCT
GGACCCAAAC GAATTATTCA ATATGTAATG GTCTTGTTTT TGGGATTTGC TTCTGGCTTG
GGCGTAGCGT TTTTAATTAG TCAATTATCT CCAGTTCTGT TTCGAGCTTC GCAACTCAAA
TCGGTTACCG ATTGCCCTGT GTTAGGTGTG GTAGGCCACT TGGAAATAGA CAAAGTAAAA
GGACGCAACC GTATAAAAGT ACTTGTTTTT TCTGTGTCAA CGGGCCTTAT ACTTTTGATG
TTTGCTACGG TTGTTGCGAT TGACATAACA AATAAGTCGT TCTTACAGGG GTTATTTTAA
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| Protein sequence | MQELQSLFIL GSDYLKGIWI KKRYVIICSW LICPAGFLYV ANQPDYYASS ATVHVDTRSM
LQPLLRGLAI QTNKAQEIRL MAKTFFTPEN VAKIARNSDL DLTTKSDAQF DSLVNRLKNQ
IQLRSTSRDN IYRISYNNRN PAVAHRVVQE TLNLFVEGAL GDNRRNSDNA ERFIDNEIAE
YENRLMESEQ RLADFKRNYA DILPVQGSFY SRLANEKSRL STIELEIKQT KKKLEAFSKQ
LANAKTQLSS GNSENSGLST RYDSRIRSLE QKLDELSLRF TEQHPDVIET KALIEALETR
RSEEIKALVR ESGEEPVQLN ALSRDLSLEM SKLESQLASQ LVQRDDIASR ILELQSKIDL
VPQIEAESTA LNRDYGILKS KYNSLLARKE SAELAKRAEL SGEDIQFKIL QPPKLPTKPA
GPKRIIQYVM VLFLGFASGL GVAFLISQLS PVLFRASQLK SVTDCPVLGV VGHLEIDKVK
GRNRIKVLVF SVSTGLILLM FATVVAIDIT NKSFLQGLF
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