Gene MADE_02556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02556 
Symbol 
ID6777649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp2778943 
End bp2780067 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content45% 
IMG OID642755996 
Producthypothetical protein 
Protein accessionYP_002126846 
Protein GI196157357 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTAGAG CACGCTGGTC CCTTTCCCAT TACTTTCACC AACGTCTGTT AGGTTGGCTA 
GATAATAGAG TTCCGGCCGC GAACGAGCAT CACCTTAACC TAAACAGCAT CTTTATATTG
CCAAGTGGGT TTGGCTGGTC TTTTATCATC TTGTCGTTAT GTTTGTTTTT ACTTGGAACC
AACTATCAAA ATAACTTAAT GCTGCTGCTT AGCTACCTGT GTTTAAGCAT TATGCTGCTG
ACATTATTTT ATACCCATCA AAACTTCGCA CGCTTAGCGT TAAAGTCGCT TCCTCCCAGG
CCTTTTCACT GCAATCAAAA CGGCGAACTG CTGGTGCAGG TTGTGCCCCA TACGAAGGCA
CCAACTAAAA ACTGTTATGG TGTATTGTCG TTTAAATGGT TAAGTACTAC CCGCCTTTCA
AAGCGTGACG CGCACCCACT TGCTGTCGAG GCAGCAACGC GTAATCATCA CACGTCTTTT
AGCGCTCAGC TATCAGCTAG TATCAATAGT CAACAAAAAC AAACACTGCG CATCCCTTTT
CAGATAAAAA CGCGAGGGCA CTATGAATTA GGGCGACTGA CGATTGCCTG TGACTTTCCT
CTTGGTCTTT ATAAGTGTTG GACCCATCTG GATTTTAACC AAGCGGTGAC GGTTTACCCT
AAGTCTCAGG AGGGCCCTGT CGTTGTTAAC AACATCGCTA CTGATGAAGC GTCTACTGCG
TCGAAAGATA AGCATAACGG TAACGAAGAT TTCTATGCAT TAAACGACTA TGAAGTGGGT
CAGCCTTTAA ACCGAGTATC GTGGAAACAT GTGGCTAAAA ACGGTAACTG GGTTACAAAG
TCTTTTACCG CGCTAAAAAG CAATAGTTAT GTTATTAGCC TATCATCCGC TACCGACACG
GAAGCCGCAC TTGCTGCACT GACCCACGCC ACGATCACAT TTTCTGAGGC TAACCGCGTA
TTTGGCCTCT CTTATAAAGG TATTCATATT CCCCCTAATC ACGGCGTAAA GCATAGGCAT
GAATGCCTAG CGGCGCTCGC CTGTTTCGAA AATAGTACTC CCTTTAACAA CGCAGGTTCA
TCTTCCTTAC AACAAGATTC AAATCGGATA AGGGCGGTAA AATGA
 
Protein sequence
MGRARWSLSH YFHQRLLGWL DNRVPAANEH HLNLNSIFIL PSGFGWSFII LSLCLFLLGT 
NYQNNLMLLL SYLCLSIMLL TLFYTHQNFA RLALKSLPPR PFHCNQNGEL LVQVVPHTKA
PTKNCYGVLS FKWLSTTRLS KRDAHPLAVE AATRNHHTSF SAQLSASINS QQKQTLRIPF
QIKTRGHYEL GRLTIACDFP LGLYKCWTHL DFNQAVTVYP KSQEGPVVVN NIATDEASTA
SKDKHNGNED FYALNDYEVG QPLNRVSWKH VAKNGNWVTK SFTALKSNSY VISLSSATDT
EAALAALTHA TITFSEANRV FGLSYKGIHI PPNHGVKHRH ECLAALACFE NSTPFNNAGS
SSLQQDSNRI RAVK