Gene MADE_02517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02517 
Symbol 
ID6776700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp2733849 
End bp2734790 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content50% 
IMG OID642755956 
ProductXanthine and CO dehydrogenase maturation factor, XdhC/CoxF family protein 
Protein accessionYP_002126807 
Protein GI196157318 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1975] Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family 
TIGRFAM ID[TIGR02964] xanthine dehydrogenase accessory protein XdhC 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGCGT CTTTTCGTGC CAAGCGCTGG TACGAGGGCA TAGCCGAGTG CCAGCAACAA 
AACGAAGGCT ATGTACTGGT TACCGTGGTG GGAACAGCGG GCTCTACCCC TCGAGAGTCA
GGTAGCAAGA TGGTAGTTAC AGCATCGCAT ACCATAGATA CCATAGGCGG TGGACATCTT
GAATTTGATG CGATAAGTCG TGCACGTGCC TACCTCGCTA AGGGCGAAAC GCGTACTGAG
CTACATAGCT ACCCGCTAAG CAGTGCTTTA GGGCAATGCT GCGGAGGTGC CGTAAAAGTG
CTGTTTGATG TATGTAACCT ACATCAGCAG CAGGTTGCTA TTTTTGGTGC AGGCCATGTA
GCTAAGGCCC TTGTGCCTAT TTTGGCCCAA CTTCCCGTAC GCATTGCATG GATAGACAGC
CGAGAAGACT TGTTTCCCGA CGCGTTACCT GCCAACGTAC AAAAAATTGT GGAAGACGCG
CCGGAAAGTG AAGTAAGGCA TTTAGATGAA AACAGCTGGC TCATTATACT TACTCACGAT
CATCAACTTG ACTATCGCAT CACCGAGCAG GCGTTGAAGC ACCCTTCCCT GCCTTTTGTG
GGTTTAATTG GGTCTGATAC AAAAGCCAAA CGATTTAAAA CGAAGCTTAC GCATCGCGGT
TTTGATGAAC ATGCATTAGC ACGCTTAGTG ACGCCAATCG GTAATCGCGA TATTCCAGGT
AAGCAGCCAA TTGAAGTCGC TGTTTCGATT TCGGCGCAAA TTATCGCTCG GCTTCACCAC
GACAACCGCA GCGCGACGCC TTCTGCGGTA AGTGACGTTA GCGTGAGTCA CATGCAGACG
AGTAAATTAA ATAAGACTGG GTGCGAGCAG CTCATTGCCA CCACGCTAGG TGACAGTGAA
AGCTCGAGCA GCAAAAAGGA TACTACCCGT GACATTAAAT GA
 
Protein sequence
MTASFRAKRW YEGIAECQQQ NEGYVLVTVV GTAGSTPRES GSKMVVTASH TIDTIGGGHL 
EFDAISRARA YLAKGETRTE LHSYPLSSAL GQCCGGAVKV LFDVCNLHQQ QVAIFGAGHV
AKALVPILAQ LPVRIAWIDS REDLFPDALP ANVQKIVEDA PESEVRHLDE NSWLIILTHD
HQLDYRITEQ ALKHPSLPFV GLIGSDTKAK RFKTKLTHRG FDEHALARLV TPIGNRDIPG
KQPIEVAVSI SAQIIARLHH DNRSATPSAV SDVSVSHMQT SKLNKTGCEQ LIATTLGDSE
SSSSKKDTTR DIK