| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02489 |
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| Symbol | |
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| ID | 6778738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 2704358 |
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| End bp | 2705461 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642755928 |
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| Product | putative mechanosensitive channel protein (MscS family) |
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| Protein accession | YP_002126779 |
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| Protein GI | 196157290 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGACA GTGAAGGCGG TGGCGTAACA AGCTTCACGA ACGCGCAATC GTTGCTTTCC
TCGCTTTGGG AAAGTTTTGT ATACCGTTTA CCCGGGTTAG CGCTTGGTGC GGTTATCATG
GTGGCGTTTA TACTGTTAGC CCCTCATGTG GCAAAAGTGC TGGTAAAGCC CTTTACTCGC
ACTACTGCGT CGCCACTGTT ACGTTCGGTT ATTCAGCGCA GCGTAAGCCT TATACTTATC
TTACTTGGCA TATATCTATT TCTGTTTTTG GCAGGGTTAA CAGGCTTTGC AATTGCTGTG
GTGAGCGGTA CTGGCGTAGT GGGGCTTATT TTAGGTTTCG CCTTTAGAGA TATTGCAGAG
AACTTTATAT CAAGTTTACT TCTTACCATT CAAAGGCCGT TTAGAATAGG CGATATTGTT
CAAATAAACG AGTTCGTGGG TATTATTCAG AAGGTGACTG CGCGCGCCAC CACGCTGGTT
GATTTCGATG GCAATCACAT TCAAATTCCT AACGCGACGA TTTACAAGGG CGTTATTAAA
AACCTTACCG CCAACCCGCT TATGCGCGGT CATTTTGTGA TTGGTGTGGG TTACGACTCA
GACATACAGC ATGCACAAAA AATTGCGCGT GACGTGACTA ATGCGCAAGA TAACGTGCTG
CACGACCCAG AGCCACAAAT TCTTATCGAT GAGCTAGGGG CGTCAACCTA CAACGTTAAA
GTATATTTTT GGGTGAATGT TGAGAAAACC AGCGTACTAA AAATGTCGTC TGTCTTAATG
CGCAACATTA CCCAAGCGTA CTTAGATGCT GATATTAGCA TGCCAGACGA TGCGCGAGAG
CGTATTTTTC CGCAGGGCTT AGCGATTACC CGCACTGATG ACGCACACCC TGAACCTGAA
AAACGCGCCA CAGATGAGCA TGGTGAAGGC GGCGCAGCGA CTCGCACCCA GCATAAACCC
CAAAGCGATG CAAAGCGCAG CGAAAGGCAT CAATCAGATA GCTCACAAAA CAGCGAAGCG
GATGACGTTA CCTCTGAAGC GCATGAGATT AGAGAACAGG CCCGTAAGTC TCGAGACCCC
GAGGCCGGTG AAAATATTTT ATAA
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| Protein sequence | MQDSEGGGVT SFTNAQSLLS SLWESFVYRL PGLALGAVIM VAFILLAPHV AKVLVKPFTR
TTASPLLRSV IQRSVSLILI LLGIYLFLFL AGLTGFAIAV VSGTGVVGLI LGFAFRDIAE
NFISSLLLTI QRPFRIGDIV QINEFVGIIQ KVTARATTLV DFDGNHIQIP NATIYKGVIK
NLTANPLMRG HFVIGVGYDS DIQHAQKIAR DVTNAQDNVL HDPEPQILID ELGASTYNVK
VYFWVNVEKT SVLKMSSVLM RNITQAYLDA DISMPDDARE RIFPQGLAIT RTDDAHPEPE
KRATDEHGEG GAATRTQHKP QSDAKRSERH QSDSSQNSEA DDVTSEAHEI REQARKSRDP
EAGENIL
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