Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_02427 |
Symbol | |
ID | 6776983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 2631142 |
End bp | 2631534 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642755866 |
Product | putative selenocysteine lyase |
Protein accession | YP_002126717 |
Protein GI | 196157228 |
COG category | [R] General function prediction only |
COG ID | [COG2166] SufE protein probably involved in Fe-S center assembly |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCATCCG AAGATAATTT ACTTCCTCTT GGCGAATCGC TGGCTAATGC GAAAGGGTGG GATGACTTTA CTCGCACACT CATGTTAGCG GGAAAGGCGC TAACTCCGCT ACCACAGCCA GAGCGCAATG ATAATACTGC GGTGGAAGGG TGTGAAAGCC CAGTATGGTT AGCTTTTTCT CACGATGAAG GCTGTCTTAT GGCGTTTTCA CCAAGTAAGG TAATACGCGG TGTACTCGCC GTTTTACTTG AAAAAGCAAA TTCACTTACC AAGCAGCAGC GAGCGGCCTT TGATTTTGAA AATTATTTAT CGCAATGCCA ACTTGAGCGC CACTTAAGCC AATCGCGAGG AAACGGGATC AAGTCGGTTA TAGCGAAGCT TAAGGATATC TAA
|
Protein sequence | MSSEDNLLPL GESLANAKGW DDFTRTLMLA GKALTPLPQP ERNDNTAVEG CESPVWLAFS HDEGCLMAFS PSKVIRGVLA VLLEKANSLT KQQRAAFDFE NYLSQCQLER HLSQSRGNGI KSVIAKLKDI
|
| |