Gene MADE_02427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02427 
Symbol 
ID6776983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp2631142 
End bp2631534 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content46% 
IMG OID642755866 
Productputative selenocysteine lyase 
Protein accessionYP_002126717 
Protein GI196157228 
COG category[R] General function prediction only 
COG ID[COG2166] SufE protein probably involved in Fe-S center assembly 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATCCG AAGATAATTT ACTTCCTCTT GGCGAATCGC TGGCTAATGC GAAAGGGTGG 
GATGACTTTA CTCGCACACT CATGTTAGCG GGAAAGGCGC TAACTCCGCT ACCACAGCCA
GAGCGCAATG ATAATACTGC GGTGGAAGGG TGTGAAAGCC CAGTATGGTT AGCTTTTTCT
CACGATGAAG GCTGTCTTAT GGCGTTTTCA CCAAGTAAGG TAATACGCGG TGTACTCGCC
GTTTTACTTG AAAAAGCAAA TTCACTTACC AAGCAGCAGC GAGCGGCCTT TGATTTTGAA
AATTATTTAT CGCAATGCCA ACTTGAGCGC CACTTAAGCC AATCGCGAGG AAACGGGATC
AAGTCGGTTA TAGCGAAGCT TAAGGATATC TAA
 
Protein sequence
MSSEDNLLPL GESLANAKGW DDFTRTLMLA GKALTPLPQP ERNDNTAVEG CESPVWLAFS 
HDEGCLMAFS PSKVIRGVLA VLLEKANSLT KQQRAAFDFE NYLSQCQLER HLSQSRGNGI
KSVIAKLKDI