Gene MADE_02424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02424 
Symbol 
ID6778251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp2627638 
End bp2628453 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content46% 
IMG OID642755863 
Productputative acyl-CoA thioesterase, TesB family protein 
Protein accessionYP_002126714 
Protein GI196157225 
COG category[I] Lipid transport and metabolism 
COG ID[COG1946] Acyl-CoA thioesterase 
TIGRFAM ID[TIGR00189] acyl-CoA thioesterase II 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGTAG ACGAATTGCT CAATATCCCT CAGTTATCAC AGACTTCGGA AAACACATGG 
AAGGTTGATG GCCTTATCAT TCCCAAAACG TGGGGACAGG GCCGTACCGC ATTTGGCGGC
ATTTCTGCCG GTATGCTCTA CTGTGCAGTA AAGCAACAAG TTACTGACAA TCGGGTATTG
CGCTCATTCA CCACTAACTT TGTGGGCCCT TTGTCACTTG AAGCTCCTTT TTCTATTGAA
GTTACTTTGC TAAGAACGGG TAAAAACGTA TCGCAATTTA CGGCACACGC TATTCAAAAC
GGAAAAAGCT GCGTGTTCTC TCAAGCCTGC TTTGGCGTTG CCAGGGCGTC TGGAATTCGC
GTCGAGAACA ACGAAAAGCA CGATATGCCT TTACCAAATA AGGCTAAATT CATACCGCAA
ATTCCTAAAG TAACGCCAAA ATTTTTGCGT TACTTTGACT TAGCCATCGA CGAAGGTGGC
ATTCCATTTA CGCGCAAGAA AACCAGTCAC TACCATGGAT TTATGCGTTT TAAAAAGGCG
CCTGAAGCCA TTACCGATGC CCATATCATC ACCATGATTG ATGCATGGCC GCCAACCTTG
CTGCAAATGA TGAAGCTGCC TGCACCAGCA AGCACAGTTA GCTGGAATTT AGAGTTTATT
CATCCGCATA AACCTGTAAG CCCCACCGAT TGGTTTGGCT ATAAAGCGCA TACGCGACAA
GCGGCCGATG GCTACGGACA TACGGAAGCA ACAATTTGGG ATAAAGACAA CGAGGTGATT
GCGATAAGCA GGCAAACCGT CGCGATTTTC GATTAA
 
Protein sequence
MTVDELLNIP QLSQTSENTW KVDGLIIPKT WGQGRTAFGG ISAGMLYCAV KQQVTDNRVL 
RSFTTNFVGP LSLEAPFSIE VTLLRTGKNV SQFTAHAIQN GKSCVFSQAC FGVARASGIR
VENNEKHDMP LPNKAKFIPQ IPKVTPKFLR YFDLAIDEGG IPFTRKKTSH YHGFMRFKKA
PEAITDAHII TMIDAWPPTL LQMMKLPAPA STVSWNLEFI HPHKPVSPTD WFGYKAHTRQ
AADGYGHTEA TIWDKDNEVI AISRQTVAIF D