| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02398 |
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| Symbol | |
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| ID | 6778017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 2592285 |
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| End bp | 2594990 |
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| Gene Length | 2706 bp |
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| Protein Length | 901 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642755837 |
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| Product | putative tonB-dependent receptor |
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| Protein accession | YP_002126688 |
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| Protein GI | 196157199 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01782] TonB-dependent receptor |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.835744 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATTA AAACCGCGTA CTCTTCTCTT GCACTTGCTT GCGTAACGGC ACTTGGCCTC
AGCATTGCTT CTCCTGTTCT GGCGGCAGAT GGCGTAATCA TTGGCTCTGT AAAAGATGCC
GCTAAGGCCC GAAGCTACAA CGGCGCTAAA ATAAAGCTTA TTGAATTAGG ACTTGTTACT
GAGGCAGGCC GAGACGGCAC TTTTCGCTTT CCCTCTATTC CTAAAGGCAC TTACACGCTA
GAAATTTCTT ATTTAGGTGA AGATACCGTC ACGCAAACCA TCAAGGTGGA AGATAATGAC
ATAGCGCGGG CCTCAGTCGA ATTCGGTAGC GGTGAGACCA TTGACGAGAT ACTGGTACGA
GGGCAACGAA GCGGACAGGC AAGCGCCATT AATCAGCAGC GAGTTTCTGA CCGCATATCT
TCGATTGTTT CTGCAGATGC CATTGGCCAA TTCCCTGACC AAAACGCAGC AGAATCGCTA
CAGCGCTTGC CCGGCCTCTC TATTGAACGT GACCAAGGTG AAGGTCGCTT TGTAGGGATC
CGCGGTATCG ATCCAAACTT AAACAATGTC ACCATCAACG GGTTAAACAT TCCTTCGCCT
GAGTCTGGCG TGCGCTCTGT TGCCCTAGAT GTCATTCCTT CAGAACTCAT TCAAACACTA
GAAGTATCGA AATCTGTCAC ACCTGATATG GATGGTGATG CCATAGGTGG TTCAGTAGCC
GTTAAAAGCG TTAGTGCGTT TGACAAGGCT CGCGACACCG CAAGCGTTAC TGTTCAAGCA
AGCCAAAATG ATTTGCGCGA TGAAACCAGC CCAAAAGTAT CAGGTACCTT TACCAAGAAA
CTTTCATCTA AATGGGGCGT TGCCGGTGCT GTTTCATATT TCGACAGAGA CTTTGGTTCT
GATAATGTAG AAAGCAACGG TGACGACGAA CTTGAACAGC GCCACTACAC CATTACACGG
GAGCGTTTAG GTAGTGCGTT GAACATAGAT TTTCGCCCTG ACTTCAACAA CCAATATTTC
TTACGCACCT TATACAGTGA ATTTTCTGAT GATGAATATC GCCAAGGCAA TATCTTCACC
TTTGACGGCG AAGATTCGGA AATTGAAAGA GAAAGTAAAG ATCGTTTTGA AAGCCAAAGT
ATCTTCACGG TCGCATTAGG CGGTGAACAC CAGCTAGATA CATGGGAAGC GAACTGGCAG
CTAGGCTACG CAAAATCTGA CGAAGATGAA CCTGACGCTT TGTACTATAT ATTTAAAACA
GAGAATGACA GCATTGATGC CGACTTAAAC ACCATGCGCC CTACTGTTTC ACAGAATGCT
GATGCCATGG ATTTGTCGAC CTATGAAGTA GATGAAATAA GCTTTGAAGA TAACTACACC
AAAGATACCG AAACCAGCAT CAAATTTGAT GCGGCGCGCC CTATTAATGT AGGTGGCTAC
ATCGGTGAAT TAAAATTTGG TTCAAAATAC CGCAGCCGAG AGAAAGACCG AGACAGCAGT
ATTACTATTT TCGATGGTGA CTTTGATGAC CTAGATGCCG CTCAATTTGG CGCAGCAAGC
CCAGATTATT CACTCGACAA TTTCGGTCCA GGGCTTAACC GAGGCGTAAT GCGCAGTTAT
TTTAACGATA ACCGTGAGGG CCTTGAGGTT GATAGTCTAA ACTCAGACGT TGAATCTCGC
GGTGCTACGT ACGTAAACGA AGAAGACATC TTTGCCGCTT ATATCATGGG CAGCGTAGAT
ATTGAAAAGC TTCACTTGGT CGCTGGTGTT CGCTACGAGC GTACTGACTT TTCAACTTCG
GGCATGCGCG TAGAGCTTGT TGAAAACGAG CAAACTGACG TAGAAGAAGT GGTGAATACG
CCTTGGGAAG CGGAGCGTGA CTATGATCAC TGGCTACCTA GCGTGAACGC TAGATACACA
TTTTCTGACA AGCTACAGCT TCGCGCTGCT TACACTCAAA CCATTTCTAG ACCTAAGTTT
GAAGATGTCG CAGCATTTCA AATAATCGAA AGCAAAACAG AAGAAGACGA TGGTGTATTT
GTTACTGAAC GCGAAGCAGA AGTCGGTAAC CCAGAGCTTC AGCCTTACGA AGCTCAGAAC
GTTGACTTAT CTCTTGAATA CTACCCTGGC GACGTTGGCG TCATTTCAGC CGGTCTTTTT
TATAAGAATA TCGATAATTT CGTTGTTTAT GCCGATGTTG CAGGTACCGC GGGCTGGGAA
GGCTTCGAAG AGGTCATTCA ACCCATCAAC GGCGACTCTG CAGATTTGAC CGGCTTAGAG
CTCTCTTGGG TAAAAGCCTT TAACAACGGT TTTATCGTGT CTGCCAACGC TACTTTCACC
GACTCTGAAG CAACCACCTT TTTGGATGGC GAGAAGTTTG AAACGCAGCT ACCGAATCAG
TCTGATCGCA TTGGCAACTT AACCATAGGC TATGAGGCCA ATGATTTTAG CGTACGACTT
GCCACCACCT ATAAAAGTGA AAACTTTGAA GAAATTGACG GCGATATGCT GAGATTTGAA
GATGACCATG TACAAATGGA CTTCATGGCA CGTTACTACA TTAACGACAC CATGCAGGTA
TATTTTAACG GCATTAACTT AGGTGATGAA CCTTTCTACA ACTACTTCGA TACGCGCAGT
CAAAACGCGC AGTACGAAGA GTATGGCCGT ACGTTCGAAC TAGGTTTTAC TTGGCAGCTA
AACTAG
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| Protein sequence | MKIKTAYSSL ALACVTALGL SIASPVLAAD GVIIGSVKDA AKARSYNGAK IKLIELGLVT
EAGRDGTFRF PSIPKGTYTL EISYLGEDTV TQTIKVEDND IARASVEFGS GETIDEILVR
GQRSGQASAI NQQRVSDRIS SIVSADAIGQ FPDQNAAESL QRLPGLSIER DQGEGRFVGI
RGIDPNLNNV TINGLNIPSP ESGVRSVALD VIPSELIQTL EVSKSVTPDM DGDAIGGSVA
VKSVSAFDKA RDTASVTVQA SQNDLRDETS PKVSGTFTKK LSSKWGVAGA VSYFDRDFGS
DNVESNGDDE LEQRHYTITR ERLGSALNID FRPDFNNQYF LRTLYSEFSD DEYRQGNIFT
FDGEDSEIER ESKDRFESQS IFTVALGGEH QLDTWEANWQ LGYAKSDEDE PDALYYIFKT
ENDSIDADLN TMRPTVSQNA DAMDLSTYEV DEISFEDNYT KDTETSIKFD AARPINVGGY
IGELKFGSKY RSREKDRDSS ITIFDGDFDD LDAAQFGAAS PDYSLDNFGP GLNRGVMRSY
FNDNREGLEV DSLNSDVESR GATYVNEEDI FAAYIMGSVD IEKLHLVAGV RYERTDFSTS
GMRVELVENE QTDVEEVVNT PWEAERDYDH WLPSVNARYT FSDKLQLRAA YTQTISRPKF
EDVAAFQIIE SKTEEDDGVF VTEREAEVGN PELQPYEAQN VDLSLEYYPG DVGVISAGLF
YKNIDNFVVY ADVAGTAGWE GFEEVIQPIN GDSADLTGLE LSWVKAFNNG FIVSANATFT
DSEATTFLDG EKFETQLPNQ SDRIGNLTIG YEANDFSVRL ATTYKSENFE EIDGDMLRFE
DDHVQMDFMA RYYINDTMQV YFNGINLGDE PFYNYFDTRS QNAQYEEYGR TFELGFTWQL
N
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