Gene MADE_02319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02319 
Symbol 
ID6778961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp2506276 
End bp2507196 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content47% 
IMG OID642755758 
Producthaloalkane dehalogenase 
Protein accessionYP_002126609 
Protein GI196157120 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGTCC TCAAAACACC GGAAAGTGCT TTTGATAAAA TACCCGACTT TCCTTACGTG 
CCTCGGTATG TCGCAGTTAC CGATACGATA AGCAGTGAAA TTACGATGGC GTACTATCAG
TGTGGCCCGG CTGACGGCCA TACCATTCTA TTAATGCACG GCGAACCCAC ATGGGCCTAT
TTGTACAGAA AGATGATGCC TATATTAGCA AAGGCGGGGT TTAACGTAGT GGTTCCCGAT
TTAATAGGCT TTGGCCGTTC TGATAAGCCA ATGCGCAAAG AGGACTATAC CTACGCAAGG
CACGTTATCT GGCTTAAAGA ATGGTTTACT CAGGTTGTTA AAGGACCGAC TACATTGTTT
TGCCAAGATT GGGGTGGGCT TTTGGGGTTA CGACTTGTCG CAGATATGCC GGAGCGCTTT
ACTGGTGTAA TGGTATCTAA TACAGGGTTA CCTACTGGAG ATCATCCGGC AAGCGACGCG
TTTATAAAAT GGCGCCGTTT TTCTCAAGAT ACACCGGTTT TTCCCACTTC GGCCATTATC
CAAAACGCTA CGGTATCGGA TTTACACCAT ACTACCCTAG CCGCCTATGA TGCGCCCTTT
CCAGACGAAA GTTACAAAGC AGGTGCGCGC ATGTTCCCTT TATTAGTGCC CACAAGTCCG
GATAATCCAG AGGCACAGGC CAACAGGCTG GCGTGGGAAA AACTGAAACA GTTTAACAAA
CCTTTTATTA CTGCGTATGG CGACAGCGAT CCAATAACCA AAGGCGGCGA AAAGATATTC
CAGAAACTAG TCCAAGGCTG CGATGGCATG GCGCACACCA CGGTTAAAAA CGGCGGACAC
TTCATTCAAG AAGACCAGGG TGAAAAGTTA GCCGAATTAC TTATACGGTT TATTCAACAA
ACACATCAGT CAACAAATTA A
 
Protein sequence
MQVLKTPESA FDKIPDFPYV PRYVAVTDTI SSEITMAYYQ CGPADGHTIL LMHGEPTWAY 
LYRKMMPILA KAGFNVVVPD LIGFGRSDKP MRKEDYTYAR HVIWLKEWFT QVVKGPTTLF
CQDWGGLLGL RLVADMPERF TGVMVSNTGL PTGDHPASDA FIKWRRFSQD TPVFPTSAII
QNATVSDLHH TTLAAYDAPF PDESYKAGAR MFPLLVPTSP DNPEAQANRL AWEKLKQFNK
PFITAYGDSD PITKGGEKIF QKLVQGCDGM AHTTVKNGGH FIQEDQGEKL AELLIRFIQQ
THQSTN