| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02293 |
|---|
| Symbol | |
|---|
| ID | 6776025 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 2478371 |
|---|
| End bp | 2479162 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642755727 |
|---|
| Product | tryptophan synthase subunit alpha |
|---|
| Protein accession | YP_002126583 |
|---|
| Protein GI | 196157094 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0159] Tryptophan synthase alpha chain |
|---|
| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTACGG GCCTTGATAA GAAAAACCAA GGCGCATTCG TGCCCTTCGT CATGGTGGGC
GACCCAGATT TAGCACAGTC AGAAGCTATT ATCTGCCAGC TTATAGAAAG CGGAGCAGAT
GCGCTAGAGC TAGGCATTCC TTATTCAGAC CCGATTGCTG ACGGCCCAAC CATCCAGGCT
TCTGCCATTC GCGCACTAGA AAGCGAGGTG ACTGTAGCGG ATTGTTTGAG TGTAATCGCC
CGCGTTCGAG CAAAGTACCC TGAGGTGCCA ATTGGCTTAT TGCTGTATAG CAACCTGGTA
ATGGCGCAGG GTATCGAAAA CTTCTACAGT AAAGCGCGTG ACGCTGGCGT AGACTCAATA
CTGGTGGCAG ACGTTCCGAT TCGAGAAGCT GTGCCTTTCC AAAAAGCGGC TGAAAACACC
GGTATTTCGC AAATTTTGAT TGCACCACCG AATGCGACTG AAGAAACCAT GGAAAAGATT
GGCGAGTACT CAGAAGGTTA CACTTACCTA TTGGGTCGCG CAGGGGTTAC GGGGGCCGAA
ACTGCTGCGA ATGTTCCAGC TTCTGAGCTT ATCGAGCGTT TGAACAAACA CAAGGCTGCG
CCGGCGCTAC TAGGTTTTGG TATCTCAACG CCGGAACAAG TCAAATCTGC TATTGATGCC
GGCGCTGCAG GTGCCATTTC AGGTTCAGCG ACAGTAAATA TTATTGCCGC TAACTTATCG
GACAGTCACA AAATGCTTAG CGAGCTAGGT ACATTTGTTG AAAACATGAA AGCGGCGACA
ACTAAGGGGT AA
|
|---|
| Protein sequence | MFTGLDKKNQ GAFVPFVMVG DPDLAQSEAI ICQLIESGAD ALELGIPYSD PIADGPTIQA
SAIRALESEV TVADCLSVIA RVRAKYPEVP IGLLLYSNLV MAQGIENFYS KARDAGVDSI
LVADVPIREA VPFQKAAENT GISQILIAPP NATEETMEKI GEYSEGYTYL LGRAGVTGAE
TAANVPASEL IERLNKHKAA PALLGFGIST PEQVKSAIDA GAAGAISGSA TVNIIAANLS
DSHKMLSELG TFVENMKAAT TKG
|
|---|
| |